Can deep learning improve the automatic segmentation of deep foveal avascular zone in optical coherence tomography angiography?
被引:15
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作者:
Guo, Menglin
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机构:
Shenzhen Univ, Hlth Sci Ctr, Sch Biomed Engn, Shenzhen 518055, Peoples R China
Marshall Lab Biomed Engn, Shenzhen, Peoples R ChinaShenzhen Univ, Hlth Sci Ctr, Sch Biomed Engn, Shenzhen 518055, Peoples R China
Guo, Menglin
[1
,2
]
Zhao, Mei
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机构:
Hong Kong Polytech Univ, Fac Hlth & Social Sci, Ctr Myopia Res, Sch Optometry, Hong Kong, Peoples R ChinaShenzhen Univ, Hlth Sci Ctr, Sch Biomed Engn, Shenzhen 518055, Peoples R China
Zhao, Mei
[3
]
Cheong, Allen M. Y.
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机构:
Hong Kong Polytech Univ, Fac Hlth & Social Sci, Ctr Myopia Res, Sch Optometry, Hong Kong, Peoples R ChinaShenzhen Univ, Hlth Sci Ctr, Sch Biomed Engn, Shenzhen 518055, Peoples R China
Cheong, Allen M. Y.
[3
]
Corvi, Federico
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机构:
Univ Milan, Sacco Hosp, Dept Biomed & Clin Sci Luigi Sacco, Eye Clin, Via GB Grassi 74, I-20157 Milan, ItalyShenzhen Univ, Hlth Sci Ctr, Sch Biomed Engn, Shenzhen 518055, Peoples R China
Corvi, Federico
[4
]
Chen, Xin
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机构:
Shenzhen Univ, Hlth Sci Ctr, Sch Biomed Engn, Shenzhen 518055, Peoples R China
Marshall Lab Biomed Engn, Shenzhen, Peoples R ChinaShenzhen Univ, Hlth Sci Ctr, Sch Biomed Engn, Shenzhen 518055, Peoples R China
Chen, Xin
[1
,2
]
Chen, Siping
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机构:
Shenzhen Univ, Hlth Sci Ctr, Sch Biomed Engn, Shenzhen 518055, Peoples R China
Marshall Lab Biomed Engn, Shenzhen, Peoples R ChinaShenzhen Univ, Hlth Sci Ctr, Sch Biomed Engn, Shenzhen 518055, Peoples R China
Chen, Siping
[1
,2
]
Zhou, Yongjin
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机构:
Shenzhen Univ, Hlth Sci Ctr, Sch Biomed Engn, Shenzhen 518055, Peoples R China
Marshall Lab Biomed Engn, Shenzhen, Peoples R ChinaShenzhen Univ, Hlth Sci Ctr, Sch Biomed Engn, Shenzhen 518055, Peoples R China
Zhou, Yongjin
[1
,2
]
Lam, Andrew K. C.
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机构:
Hong Kong Polytech Univ, Fac Hlth & Social Sci, Ctr Myopia Res, Sch Optometry, Hong Kong, Peoples R ChinaShenzhen Univ, Hlth Sci Ctr, Sch Biomed Engn, Shenzhen 518055, Peoples R China
Lam, Andrew K. C.
[3
]
机构:
[1] Shenzhen Univ, Hlth Sci Ctr, Sch Biomed Engn, Shenzhen 518055, Peoples R China
[2] Marshall Lab Biomed Engn, Shenzhen, Peoples R China
[3] Hong Kong Polytech Univ, Fac Hlth & Social Sci, Ctr Myopia Res, Sch Optometry, Hong Kong, Peoples R China
Deep learning;
Automatic segmentation;
Optical coherence tomography angiography;
Deep foveal avascular zone;
RETINAL VASCULAR LAYERS;
FLUORESCEIN ANGIOGRAPHY;
DIABETIC-RETINOPATHY;
VESSEL DENSITY;
HIGH ACUITY;
EYES;
MICROVASCULATURE;
METRICS;
ASSOCIATION;
RELIABILITY;
D O I:
10.1016/j.bspc.2021.102456
中图分类号:
R318 [生物医学工程];
学科分类号:
0831 ;
摘要:
Optical coherence tomography angiography (OCTA) is extensively used for visualizing retinal vasculature, including the foveal avascular zone (FAZ). Assessment of the FAZ is critical in the diagnosis and management of various retinal diseases. Accurately segmenting the FAZ in the deep retinal layer (dFAZ) is very challenging due to unclear capillary terminals. In this study, a customized encoder-decoder deep learning network was used for dFAZ segmentation. Six-fold cross-validation was performed on a total of 80 subjects (63 healthy subjects and 17 diabetic retinopathy subjects). The proposed method obtained an average Dice of 0.88 and an average Hausdorff distance of 17.79, suggesting the dFAZ was accurately segmented. The proposed method is expected to realize good clinical application value by providing an objective and faster and spatially-quantitative preparation of dFAZ-related investigations.
机构:
Icahn Sch Med Mt Sinai, 1428 Madison Ave, New York, NY 10029 USA
New York Eye & Ear Infirm Mt Sinai, 310 East 14th St, New York, NY USAIcahn Sch Med Mt Sinai, 1428 Madison Ave, New York, NY 10029 USA
Krawitz, Brian D.
Mo, Shelley
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机构:
Icahn Sch Med Mt Sinai, 1428 Madison Ave, New York, NY 10029 USA
New York Eye & Ear Infirm Mt Sinai, 310 East 14th St, New York, NY USAIcahn Sch Med Mt Sinai, 1428 Madison Ave, New York, NY 10029 USA
Mo, Shelley
Geyman, Lawrence S.
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h-index: 0
机构:
Icahn Sch Med Mt Sinai, 1428 Madison Ave, New York, NY 10029 USA
New York Eye & Ear Infirm Mt Sinai, 310 East 14th St, New York, NY USAIcahn Sch Med Mt Sinai, 1428 Madison Ave, New York, NY 10029 USA
Geyman, Lawrence S.
Agemy, Steven A.
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h-index: 0
机构:
Suny Downstate Med Ctr, Dept Ophthalmol, 50 Clarkson Ave, Brooklyn, NY 11203 USA
SUNY Downstate Coll Med, 50 Clarkson Ave, Brooklyn, NY 11203 USAIcahn Sch Med Mt Sinai, 1428 Madison Ave, New York, NY 10029 USA
Agemy, Steven A.
Scripsema, Nicole K.
论文数: 0引用数: 0
h-index: 0
机构:
New York Eye & Ear Infirm Mt Sinai, 310 East 14th St, New York, NY USAIcahn Sch Med Mt Sinai, 1428 Madison Ave, New York, NY 10029 USA
Scripsema, Nicole K.
Garcia, Patricia M.
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机构:
New York Eye & Ear Infirm Mt Sinai, 310 East 14th St, New York, NY USAIcahn Sch Med Mt Sinai, 1428 Madison Ave, New York, NY 10029 USA
Garcia, Patricia M.
Chui, Toco Y. P.
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机构:
Icahn Sch Med Mt Sinai, 1428 Madison Ave, New York, NY 10029 USA
New York Eye & Ear Infirm Mt Sinai, 310 East 14th St, New York, NY USAIcahn Sch Med Mt Sinai, 1428 Madison Ave, New York, NY 10029 USA
Chui, Toco Y. P.
Rosen, Richard B.
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h-index: 0
机构:
Icahn Sch Med Mt Sinai, 1428 Madison Ave, New York, NY 10029 USA
New York Eye & Ear Infirm Mt Sinai, 310 East 14th St, New York, NY USAIcahn Sch Med Mt Sinai, 1428 Madison Ave, New York, NY 10029 USA
机构:
Thomas Jefferson Univ, Wills Eye Hosp, Mid Atlantic Retina, Retina Serv, Philadelphia, PA 19107 USAThomas Jefferson Univ, Wills Eye Hosp, Mid Atlantic Retina, Retina Serv, Philadelphia, PA 19107 USA
Shahlaee, Abtin
Pefkianaki, Maria
论文数: 0引用数: 0
h-index: 0
机构:
Thomas Jefferson Univ, Wills Eye Hosp, Mid Atlantic Retina, Retina Serv, Philadelphia, PA 19107 USAThomas Jefferson Univ, Wills Eye Hosp, Mid Atlantic Retina, Retina Serv, Philadelphia, PA 19107 USA
Pefkianaki, Maria
Hsu, Jason
论文数: 0引用数: 0
h-index: 0
机构:
Thomas Jefferson Univ, Wills Eye Hosp, Mid Atlantic Retina, Retina Serv, Philadelphia, PA 19107 USAThomas Jefferson Univ, Wills Eye Hosp, Mid Atlantic Retina, Retina Serv, Philadelphia, PA 19107 USA
Hsu, Jason
Ho, Allen C.
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机构:
Thomas Jefferson Univ, Wills Eye Hosp, Mid Atlantic Retina, Retina Serv, Philadelphia, PA 19107 USAThomas Jefferson Univ, Wills Eye Hosp, Mid Atlantic Retina, Retina Serv, Philadelphia, PA 19107 USA
机构:
Wenzhou Med Univ, Sch Ophthalmol & Optometry, Wenzhou, Peoples R ChinaWenzhou Med Univ, Sch Ophthalmol & Optometry, Wenzhou, Peoples R China
Zhang, Zhengxi
Mao, Jianbo
论文数: 0引用数: 0
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机构:
Hangzhou Med Coll, Zhejiang Prov Peoples Hosp, Affiliated Hosp, Dept Ophthalmol Ctr, 158 Shangtang Rd, Hangzhou, Zhejiang, Peoples R ChinaWenzhou Med Univ, Sch Ophthalmol & Optometry, Wenzhou, Peoples R China
Mao, Jianbo
Lao, Jimeng
论文数: 0引用数: 0
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机构:
Wenzhou Med Univ, Sch Ophthalmol & Optometry, Wenzhou, Peoples R China
Wenzhou Med Univ, Affiliated Eye Hosp, Hangzhou, Peoples R ChinaWenzhou Med Univ, Sch Ophthalmol & Optometry, Wenzhou, Peoples R China
Lao, Jimeng
Deng, Xinyi
论文数: 0引用数: 0
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机构:
Wenzhou Med Univ, Sch Ophthalmol & Optometry, Wenzhou, Peoples R China
Hangzhou Med Coll, Zhejiang Prov Peoples Hosp, Affiliated Hosp, Dept Ophthalmol Ctr, 158 Shangtang Rd, Hangzhou, Zhejiang, Peoples R ChinaWenzhou Med Univ, Sch Ophthalmol & Optometry, Wenzhou, Peoples R China
Deng, Xinyi
Fang, Yuyan
论文数: 0引用数: 0
h-index: 0
机构:
Wenzhou Med Univ, Sch Ophthalmol & Optometry, Wenzhou, Peoples R China
Yongkang Hosp, Yongkang, Peoples R ChinaWenzhou Med Univ, Sch Ophthalmol & Optometry, Wenzhou, Peoples R China
Fang, Yuyan
Chen, Nuo
论文数: 0引用数: 0
h-index: 0
机构:
Wenzhou Med Univ, Sch Ophthalmol & Optometry, Wenzhou, Peoples R ChinaWenzhou Med Univ, Sch Ophthalmol & Optometry, Wenzhou, Peoples R China
Chen, Nuo
Liu, Chenyi
论文数: 0引用数: 0
h-index: 0
机构:
Wenzhou Med Univ, Sch Ophthalmol & Optometry, Wenzhou, Peoples R China
Midwestern Univ, Chicago Coll Optometry, Downers Grove, IL USAWenzhou Med Univ, Sch Ophthalmol & Optometry, Wenzhou, Peoples R China
Liu, Chenyi
Chen, Yiqi
论文数: 0引用数: 0
h-index: 0
机构:
Hangzhou Med Coll, Zhejiang Prov Peoples Hosp, Affiliated Hosp, Dept Ophthalmol Ctr, 158 Shangtang Rd, Hangzhou, Zhejiang, Peoples R ChinaWenzhou Med Univ, Sch Ophthalmol & Optometry, Wenzhou, Peoples R China
Chen, Yiqi
Shen, Lijun
论文数: 0引用数: 0
h-index: 0
机构:
Hangzhou Med Coll, Zhejiang Prov Peoples Hosp, Affiliated Hosp, Dept Ophthalmol Ctr, 158 Shangtang Rd, Hangzhou, Zhejiang, Peoples R ChinaWenzhou Med Univ, Sch Ophthalmol & Optometry, Wenzhou, Peoples R China
机构:
Ophthalmology Clinic,University of MarcheOphthalmology Clinic,University of Marche
Rodolfo Mastropasqua
Lisa Toto
论文数: 0引用数: 0
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机构:
Ophthalmology Clinic,Department of Medicine and Science of Ageing,University G.d'Annunzio Chieti-PescaraOphthalmology Clinic,University of Marche
Lisa Toto
Alessandra Mastropasqua
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机构:
Ophthalmology Clinic,Department of Medicine and Science of Ageing,University G.d'Annunzio Chieti-PescaraOphthalmology Clinic,University of Marche
Alessandra Mastropasqua
Raffaella Aloia
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机构:
Ophthalmology Clinic,Department of Medicine and Science of Ageing,University G.d'Annunzio Chieti-PescaraOphthalmology Clinic,University of Marche
Raffaella Aloia
Chiara De Nicola
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机构:
Ophthalmology Clinic,Department of Medicine and Science of Ageing,University G.d'Annunzio Chieti-PescaraOphthalmology Clinic,University of Marche
Chiara De Nicola
Peter A Mattei
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机构:
Ophthalmology Clinic,Department of Medicine and Science of Ageing,University G.d'Annunzio Chieti-PescaraOphthalmology Clinic,University of Marche
Peter A Mattei
Guido Di Marzio
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机构:
Ophthalmology Clinic,Department of Medicine and Science of Ageing,University G.d'Annunzio Chieti-PescaraOphthalmology Clinic,University of Marche
Guido Di Marzio
Marta Di Nicola
论文数: 0引用数: 0
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机构:
Department of Experimental and Clinical Sciences,Laboratory of Biostatistics,University G.d'Annunzio Chieti-PescaraOphthalmology Clinic,University of Marche
Marta Di Nicola
Luca Di Antonio
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机构:
Ophthalmology Clinic,Department of Medicine and Science of Ageing,University G.d'Annunzio Chieti-PescaraOphthalmology Clinic,University of Marche
机构:
Univ Hlth Sci, Bursa Yuksek Ihtisas Training & Res Hosp, Dept Ophthalmol, TR-16310 Bursa, TurkeyUniv Hlth Sci, Bursa Yuksek Ihtisas Training & Res Hosp, Dept Ophthalmol, TR-16310 Bursa, Turkey
Can, Gamze Dereli
Can, Mehmet Erol
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机构:
Bursa City Hosp, Dept Ophthalmol, Bursa, TurkeyUniv Hlth Sci, Bursa Yuksek Ihtisas Training & Res Hosp, Dept Ophthalmol, TR-16310 Bursa, Turkey
Can, Mehmet Erol
Ekici, Arzu
论文数: 0引用数: 0
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机构:
Univ Hlth Sci, Bursa Yuksek Ihtisas Training & Res Hosp, Dept Pediat Neurol, Bursa, TurkeyUniv Hlth Sci, Bursa Yuksek Ihtisas Training & Res Hosp, Dept Ophthalmol, TR-16310 Bursa, Turkey