Relation between structure and enthalpy for stacking interactions of aromatic molecules

被引:8
|
作者
Santiago, Adrian Hernandez [2 ]
Castilla, Salvador Rosas [2 ]
Rodriguez, Albino Morales [2 ]
Aleskerova, Elena [1 ]
Lantushenko, Anastasia [1 ]
Kostjukov, Viktor [1 ]
Davies, David [3 ]
Evstigneev, Maxim [1 ]
机构
[1] Sevastopol Natl Tech Univ, Dept Phys, Sevastopol, Ukraine
[2] Autonomous Univ Puebla, Fac Chem Sci, Puebla, Mexico
[3] Univ London, Sch Biol & Chem Sci, Birkbeck Coll, London, England
关键词
aromatic stacking; enthalpy; van-der-Waals energy; area of overlap; ACCESSIBLE SURFACE-AREAS; HETERO-ASSOCIATION; AQUEOUS-SOLUTION; THERMODYNAMIC PARAMETERS; FLAVIN-MONONUCLEOTIDE; SELF-ASSOCIATION; DNA; H-1-NMR; DAUNOMYCIN; DYES;
D O I
10.1080/00268976.2010.498389
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
An approximately linear correlation has been found between the enthalpy of complexation and the area of overlap of the chromophores using published structural and thermodynamical data on the self- and hetero-association of aromatic molecules measured under similar solution conditions. This finding is consistent with the assumption that short-range van-der-Waals forces dominate over other contributions to the enthalpy of stacking of aromatic molecules. It provides a 'model-independent' approach for a priori estimation of the enthalpy of aromatic-aromatic stacking interactions from knowledge of the structural properties or vice versa.
引用
收藏
页码:1941 / 1947
页数:7
相关论文
共 50 条
  • [1] The Aromatic Stacking Interactions Between Proteins and their Macromolecular Ligands
    Rahman, Mohammad Mizanur
    Muhseen, Ziyad Tariq
    Junaid, Muhammad
    Zhang, Houjin
    CURRENT PROTEIN & PEPTIDE SCIENCE, 2015, 16 (06) : 502 - 512
  • [2] Nitrosubstituted aromatic molecules as universal nucleobases: Computational analysis of stacking interactions
    Wheaton, Craig A.
    Dobrowolski, Sarah L.
    Millen, Andrea L.
    Wetmore, Stacey D.
    CHEMICAL PHYSICS LETTERS, 2006, 428 (1-3) : 157 - 166
  • [3] Synergy between experimental and computational studies of aromatic stacking interactions
    Hwang, Jung Wun
    Li, Ping
    Shimizu, Ken D.
    ORGANIC & BIOMOLECULAR CHEMISTRY, 2017, 15 (07) : 1554 - 1564
  • [4] Characterization of π-stacking interactions between aromatic amino acids and quercetagetin
    Akher, Farideh Badichi
    Ebrahimi, Ali
    Mostafavi, Najmeh
    JOURNAL OF MOLECULAR STRUCTURE, 2017, 1128 : 13 - 20
  • [5] Towards understanding π-stacking interactions between non-aromatic rings
    Molcanov, Kresimir
    Kojic-Prodic, Biserka
    IUCRJ, 2019, 6 : 156 - 166
  • [6] Substituent effects on aromatic stacking interactions
    Cockroft, Scott L.
    Perkins, Julie
    Zonta, Cristiano
    Adams, Harry
    Spey, Sharon E.
    Low, Caroline M. R.
    Vinter, Jeremy G.
    Lawson, Kevin R.
    Urch, Christopher J.
    Hunter, Christopher A.
    ORGANIC & BIOMOLECULAR CHEMISTRY, 2007, 5 (07) : 1062 - 1080
  • [7] Electrostatic control of aromatic stacking interactions
    Cockroft, SL
    Hunter, CA
    Lawson, KR
    Perkins, J
    Urch, CJ
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2005, 127 (24) : 8594 - 8595
  • [8] An In Vitro Study of Aromatic Stacking of Drug Molecules
    Jackson, Shelley N.
    Barbacci, Damon C.
    Bonci, Antonello
    Woods, Amina S.
    JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 2019, 30 (07) : 1199 - 1203
  • [9] THE RELATION BETWEEN THE EXCITATION ENERGY OF ELECTRONS AND THE ELECTROREDUCTION OF AROMATIC MOLECULES
    GRABOVSKII, ZR
    ZHURNAL FIZICHESKOI KHIMII, 1959, 33 (03): : 728 - 731
  • [10] Dependence of the aromatic-ring stacking interactions in the ternary complexes on ligand structure
    Sun, HL
    ACTA PHYSICO-CHIMICA SINICA, 2004, 20 (07) : 680 - 683