Network Inference and Maximum Entropy Estimation on Information Diagrams

被引:7
|
作者
Martin, Elliot A. [1 ]
Hlinka, Jaroslav [2 ,3 ]
Meinke, Alexander [1 ]
Dechterenko, Filip [2 ,4 ]
Tintera, Jaroslav [3 ,5 ]
Oliver, Isaura [1 ]
Davidsen, Jorn [1 ]
机构
[1] Univ Calgary, Dept Phys & Astron, Complex Sci Grp, Calgary, AB T2N 1N4, Canada
[2] Czech Acad Sci, Inst Comp Sci, Vodarenskou Vezi 2, Prague 18207, Czech Republic
[3] Natl Inst Mental Hlth, Topolova 748, Klecany 25067, Czech Republic
[4] Czech Acad Sci, Inst Psychol, Prague, Czech Republic
[5] Inst Clin & Expt Med, Videnska 1958-9, Prague 14021, Czech Republic
来源
SCIENTIFIC REPORTS | 2017年 / 7卷
基金
加拿大自然科学与工程研究理事会;
关键词
TIME-SERIES; COMPLEX NETWORK; CONNECTIVITY; MODEL;
D O I
10.1038/s41598-017-06208-w
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Maximum entropy estimation is of broad interest for inferring properties of systems across many disciplines. Using a recently introduced technique for estimating the maximum entropy of a set of random discrete variables when conditioning on bivariate mutual informations and univariate entropies, we show how this can be used to estimate the direct network connectivity between interacting units from observed activity. As a generic example, we consider phase oscillators and show that our approach is typically superior to simply using the mutual information. In addition, we propose a nonparametric formulation of connected informations, used to test the explanatory power of a network description in general. We give an illustrative example showing how this agrees with the existing parametric formulation, and demonstrate its applicability and advantages for resting-state human brain networks, for which we also discuss its direct effective connectivity. Finally, we generalize to continuous random variables and vastly expand the types of information-theoretic quantities one can condition on. This allows us to establish significant advantages of this approach over existing ones. Not only does our method perform favorably in the undersampled regime, where existing methods fail, but it also can be dramatically less computationally expensive as the cardinality of the variables increases.
引用
收藏
页数:15
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