Network Inference and Maximum Entropy Estimation on Information Diagrams

被引:7
|
作者
Martin, Elliot A. [1 ]
Hlinka, Jaroslav [2 ,3 ]
Meinke, Alexander [1 ]
Dechterenko, Filip [2 ,4 ]
Tintera, Jaroslav [3 ,5 ]
Oliver, Isaura [1 ]
Davidsen, Jorn [1 ]
机构
[1] Univ Calgary, Dept Phys & Astron, Complex Sci Grp, Calgary, AB T2N 1N4, Canada
[2] Czech Acad Sci, Inst Comp Sci, Vodarenskou Vezi 2, Prague 18207, Czech Republic
[3] Natl Inst Mental Hlth, Topolova 748, Klecany 25067, Czech Republic
[4] Czech Acad Sci, Inst Psychol, Prague, Czech Republic
[5] Inst Clin & Expt Med, Videnska 1958-9, Prague 14021, Czech Republic
来源
SCIENTIFIC REPORTS | 2017年 / 7卷
基金
加拿大自然科学与工程研究理事会;
关键词
TIME-SERIES; COMPLEX NETWORK; CONNECTIVITY; MODEL;
D O I
10.1038/s41598-017-06208-w
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Maximum entropy estimation is of broad interest for inferring properties of systems across many disciplines. Using a recently introduced technique for estimating the maximum entropy of a set of random discrete variables when conditioning on bivariate mutual informations and univariate entropies, we show how this can be used to estimate the direct network connectivity between interacting units from observed activity. As a generic example, we consider phase oscillators and show that our approach is typically superior to simply using the mutual information. In addition, we propose a nonparametric formulation of connected informations, used to test the explanatory power of a network description in general. We give an illustrative example showing how this agrees with the existing parametric formulation, and demonstrate its applicability and advantages for resting-state human brain networks, for which we also discuss its direct effective connectivity. Finally, we generalize to continuous random variables and vastly expand the types of information-theoretic quantities one can condition on. This allows us to establish significant advantages of this approach over existing ones. Not only does our method perform favorably in the undersampled regime, where existing methods fail, but it also can be dramatically less computationally expensive as the cardinality of the variables increases.
引用
收藏
页数:15
相关论文
共 50 条
  • [21] Maximum entropy principle analysis in network systems with short-time recordings
    Xu, Zhi-Qin John
    Crodelle, Jennifer
    Zhou, Douglas
    Cai, David
    PHYSICAL REVIEW E, 2019, 99 (02)
  • [22] Maximum Entropy Method and Underdetermined Systems Applied to Computer Network Topology and Routing
    Tuba, Milan
    AIC '09: PROCEEDINGS OF THE 9TH WSEAS INTERNATIONAL CONFERENCE ON APPLIED INFORMATICS AND COMMUNICATIONS: RECENT ADVANCES IN APPLIED INFORMAT AND COMMUNICATIONS, 2009, : 127 - +
  • [23] A new information dimension of complex network based on Renyi entropy
    Duan, Shuyu
    Wen, Tao
    Jiang, Wen
    PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS, 2019, 516 : 529 - 542
  • [24] Opinion evolution model of social network based on information entropy
    Huang Fei-Hu
    Peng Jian
    Ning Li-Miao
    ACTA PHYSICA SINICA, 2014, 63 (16)
  • [25] A hybrid simulation-adaptive network based fuzzy inference system for improvement of electricity consumption estimation
    Azadeh, A.
    Saberi, M.
    Gitiforouz, A.
    Saberi, Z.
    EXPERT SYSTEMS WITH APPLICATIONS, 2009, 36 (08) : 11108 - 11117
  • [26] Nonsymmetric entropy and maximum nonsymmetric entropy principle
    Liu, Cheng-shi
    CHAOS SOLITONS & FRACTALS, 2009, 40 (05) : 2469 - 2474
  • [27] Information diffusion, cluster formation and entropy-based network dynamics in equity and commodity markets
    Bekiros, Stelios
    Duc Khuong Nguyen
    Sandoval Junior, Leonidas
    Uddin, Gazi Salah
    EUROPEAN JOURNAL OF OPERATIONAL RESEARCH, 2017, 256 (03) : 945 - 961
  • [28] Quantifying complex network information based on communicability sequence entropy
    Shi DanDan
    Chen Dan
    Long HuiMin
    Wang ChengKe
    Pan GuiJun
    SCIENTIA SINICA-PHYSICA MECHANICA & ASTRONOMICA, 2019, 49 (07)
  • [29] A data assimilation approach for groundwater parameter estimation under Bayesian maximum entropy framework
    Yu, Hwa-Lung
    Wu, Yu-Zhang
    Cheung, Shao Yong
    STOCHASTIC ENVIRONMENTAL RESEARCH AND RISK ASSESSMENT, 2020, 34 (05) : 709 - 721
  • [30] Empirical Bayes estimation of pairwise maximum entropy model for nonlinear brain state dynamics
    Jeong, Seok-Oh
    Kang, Jiyoung
    Pae, Chongwon
    Eo, Jinseok
    Park, Sung Min
    Son, Junho
    Park, Hae-Jeong
    NEUROIMAGE, 2021, 244