An Iris-Like Mechanism of Pore Dilation in the CorA Magnesium Transport System
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作者:
Chakrabarti, Nilmadhab
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Hosp Sick Children, Toronto, ON M5G 1X8, CanadaHosp Sick Children, Toronto, ON M5G 1X8, Canada
Chakrabarti, Nilmadhab
[1
]
Neale, Chris
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Hosp Sick Children, Toronto, ON M5G 1X8, Canada
Univ Toronto, Dept Biochem, Toronto, ON, CanadaHosp Sick Children, Toronto, ON M5G 1X8, Canada
Neale, Chris
[1
,2
]
Payandeh, Jian
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Univ Toronto, Dept Med Biophys, Toronto, ON, Canada
Ontario Canc Inst, Div Canc Genom & Prote, Toronto, ON M4X 1K9, CanadaHosp Sick Children, Toronto, ON M5G 1X8, Canada
Payandeh, Jian
[3
,5
]
Pai, Emil F.
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Univ Toronto, Dept Biochem, Toronto, ON, Canada
Univ Toronto, Dept Med Biophys, Toronto, ON, Canada
Univ Toronto, Dept Mol Genet, Toronto, ON, Canada
Ontario Canc Inst, Div Canc Genom & Prote, Toronto, ON M4X 1K9, CanadaHosp Sick Children, Toronto, ON M5G 1X8, Canada
Pai, Emil F.
[2
,3
,4
,5
]
Pomes, Regis
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Hosp Sick Children, Toronto, ON M5G 1X8, Canada
Univ Toronto, Dept Biochem, Toronto, ON, CanadaHosp Sick Children, Toronto, ON M5G 1X8, Canada
Pomes, Regis
[1
,2
]
机构:
[1] Hosp Sick Children, Toronto, ON M5G 1X8, Canada
[2] Univ Toronto, Dept Biochem, Toronto, ON, Canada
[3] Univ Toronto, Dept Med Biophys, Toronto, ON, Canada
[4] Univ Toronto, Dept Mol Genet, Toronto, ON, Canada
[5] Ontario Canc Inst, Div Canc Genom & Prote, Toronto, ON M4X 1K9, Canada
Magnesium translocation across cell membranes is essential for numerous physiological processes. Three recently reported crystal structures of the CorA magnesium transport system revealed a surprising architecture, with a bundle of giant a-helices forming a 60-angstrom-long pore that extends beyond the membrane before widening into a funnel-shaped cytosolic domain. The presence of divalent cations in putative intracellular regulation sites suggests that these structures correspond to the closed conformation of CorA. To examine the nature of the conduction pathway, we performed 110-ns molecular-dynamics simulations of two of these structures in a lipid bilayer with and without regulatory ions. The results show that a 15-angstrom-long hydrophobic constriction straddling the membrane-cytosol interface constitutes a steric bottleneck whose location coincides with an electrostatic barrier opposing cation translocation. In one of the simulations, structural relaxation after the removal of regulatory ions led to concerted changes in the tilt of the pore helices, resulting in iris-like dilation and spontaneous hydration of the hydrophobic neck. This simple and robust mechanism is consistent with the regulation of pore opening by intracellular magnesium concentration, and explains the unusual architecture of CorA.