A Burned-Out CD8+ T-cell Subset Expands in the Tumor Microenvironment and Curbs Cancer Immunotherapy

被引:115
作者
Sanmamed, Miguel F. [1 ,2 ]
Nie, Xinxin [1 ]
Desai, Shruti S. [3 ]
Villaroel-Espindola, Franz [3 ]
Badri, Ti [1 ]
Zhao, Dejian [4 ]
Kim, Anthony W. [5 ]
Ji, Lan [1 ]
Zhang, Tianxiang [1 ]
Quinlan, Edward [1 ]
Cheng, Xiaoxiao [1 ]
Han, Xue [1 ]
Vesely, Matthew D. [1 ,6 ]
Nassar, Ala F. [1 ]
Sun, Jingwei [1 ]
Zhang, Yu [1 ,7 ]
Kim, Tae Kon [7 ]
Wang, Jun [1 ]
Melero, Ignacio [2 ]
Herbst, Roy S. [7 ]
Schalper, Kurt A. [3 ,7 ]
Chen, Lieping [1 ,6 ,7 ]
机构
[1] Yale Univ, Dept Immunobiol, New Haven, CT 06520 USA
[2] Univ Navarra, Div Immunol & Immunotherapy, CIMA, Pamplona, Spain
[3] Yale Univ, Dept Pathol, New Haven, CT 06520 USA
[4] Yale Univ, Yale Ctr Genome Anal, Dept Genet, New Haven, CT 06520 USA
[5] Yale Univ, Div Thorac Surg, New Haven, CT 06520 USA
[6] Yale Univ, Dept Dermatol, New Haven, CT 06520 USA
[7] Yale Univ, Dept Med Med Oncol, New Haven, CT 06520 USA
基金
美国国家卫生研究院;
关键词
LYMPHOCYTES; LANDSCAPE; APOPTOSIS; B7-H1;
D O I
10.1158/2159-8290.CD-20-0962
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Specific mechanisms by which tumor-infiltrating lymphocytes (TIL) become dysfunctional remain poorly understood. Here, we employed a two-pronged approach using single-cell mass cytometry and tissue imaging technologies to dissect TILs from 25 patients with resectable and 35 patients with advanced non-small cell lung cancer (NSCLC). We identified a burned-out CD8(+) TIL subset (Ebo) that specifically accumulated within the tumor microenvironment (TME) but not in adjacent nontumoral tissues. Ebo showed the highest expression of proliferation and activation markers but produced the lowest amount of IFN gamma and were the most apoptotic CD8(+) TIL subset. Using a humanized patient-derived tumor xenograft model, we demonstrated that Ebo expansion occurred within the TME in a PD-1/B7-H1 pathway-dependent manner. Ebo abundance in baseline tumor tissues was associated with resistance to anti-PD therapy in patients with NSCLC. Our study identifies a dysfunctional TIL subset, with distinct features from previously described exhausted T cells, and implies strategies to overcome immunotherapy resistance. SIGNIFICANCE: We identified a highly proliferative, overactivated, and apoptotic dysfunctional CD8(+) tumor-infiltrating subpopulation that is functionally distinct from previously described exhausted T cells. This population is expanded in lung cancer tissues in a PD-1/B7-H1-dependent manner, and its abundance is associated with resistance to cancer immunotherapy, thus becoming a potential tissue biomarker.
引用
收藏
页码:1700 / 1715
页数:16
相关论文
共 48 条
[1]   viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia [J].
Amir, El-ad David ;
Davis, Kara L. ;
Tadmor, Michelle D. ;
Simonds, Erin F. ;
Levine, Jacob H. ;
Bendall, Sean C. ;
Shenfeld, Daniel K. ;
Krishnaswamy, Smita ;
Nolan, Garry P. ;
Pe'er, Dana .
NATURE BIOTECHNOLOGY, 2013, 31 (06) :545-+
[2]   Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment [J].
Azizi, Elham ;
Carr, Ambrose J. ;
Plitas, George ;
Cornish, Andrew E. ;
Konopacki, Catherine ;
Prabhakaran, Sandhya ;
Nainys, Juozas ;
Wu, Kenmin ;
Kiseliovas, Vaidotas ;
Setty, Manu ;
Choi, Kristy ;
Fromme, Rachel M. ;
Phuong Dao ;
McKenney, Peter T. ;
Wasti, Ruby C. ;
Kadaveru, Krishna ;
Mazutis, Linas ;
Rudensky, Alexander Y. ;
Pe'er, Dana .
CELL, 2018, 174 (05) :1293-+
[3]   Restoring function in exhausted CD8 T cells during chronic viral infection [J].
Barber, DL ;
Wherry, EJ ;
Masopust, D ;
Zhu, BG ;
Allison, JP ;
Sharpe, AH ;
Freeman, GJ ;
Ahmed, R .
NATURE, 2006, 439 (7077) :682-687
[4]   Automated identification of stratifying signatures in cellular subpopulations [J].
Bruggner, Robert V. ;
Bodenmiller, Bernd ;
Dill, David L. ;
Tibshirani, Robert J. ;
Nolan, Garry P. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 111 (26) :E2770-E2777
[5]   High-Parameter Single-Cell Analysis [J].
Chattopadhyay, Pratip K. ;
Winters, Aidan F. ;
Lomas, Woodrow E., III ;
Laino, Andressa S. ;
Woods, David M. .
ANNUAL REVIEW OF ANALYTICAL CHEMISTRY, VOL 12, 2019, 12 :411-430
[6]   Anti-PD-1/PD-L1 therapy of human cancer: past, present, and future [J].
Chen, Lieping ;
Han, Xue .
JOURNAL OF CLINICAL INVESTIGATION, 2015, 125 (09) :3384-3391
[7]   An Immune Atlas of Clear Cell Renal Cell Carcinoma [J].
Chevrier, Stephane ;
Levine, Jacob Harrison ;
Zanotelli, Vito Riccardo Tomaso ;
Silina, Karina ;
Schulz, Daniel ;
Bacac, Marina ;
Ries, Carola Hermine ;
Ailles, Laurie ;
Jewett, Michael Alexander Spencer ;
Moch, Holger ;
van den Broek, Maries ;
Beisel, Christian ;
Stadler, Michael Beda ;
Gedye, Craig ;
Reis, Bernhard ;
Pe'er, Dana ;
Bodenmiller, Bernd .
CELL, 2017, 169 (04) :736-749
[8]   Microenvironment-dependent growth of preneoplastic and malignant plasma cells in humanized mice [J].
Das, Rituparna ;
Strowig, Till ;
Verma, Rakesh ;
Koduru, Srinivas ;
Hafemann, Anja ;
Hopf, Stephanie ;
Kocoglu, Mehmet H. ;
Borsotti, Chiara ;
Zhang, Lin ;
Branagan, Andrew ;
Eynon, Elizabeth ;
Manz, Markus G. ;
Flavell, Richard A. ;
Dhodapkar, Madhav V. .
NATURE MEDICINE, 2016, 22 (11) :1351-1357
[9]  
Dong HD, 1999, NAT MED, V5, P1365
[10]  
Dong HD, 2002, NAT MED, V8, P793, DOI 10.1038/nm730