A tutorial review for employing enzymes for the construction of G-quadruplex-based sensing platforms

被引:23
作者
Ma, Dik-Lung [1 ]
Wang, Wanhe [1 ]
Mao, Zhifeng [1 ]
Yang, Chao [2 ]
Chen, Xiu-Ping [2 ]
Lu, Jin-Jian [2 ]
Han, Quan-Bin [3 ]
Leung, Chung-Hang [2 ]
机构
[1] Hong Kong Baptist Univ, Dept Chem, Kowloon Tong, Hong Kong, Peoples R China
[2] Univ Macau, Inst Chinese Med Sci, State Key Lab Qual Res Chinese Med, Macau, Peoples R China
[3] Hong Kong Baptist Univ, Sch Chinese Med, Kowloon, Hong Kong, Peoples R China
基金
中国国家自然科学基金;
关键词
Oligonucleotide-based sensor; G-quadruplex; Enzyme; Sensor construction; T4 POLYNUCLEOTIDE KINASE; ROLLING-CIRCLE AMPLIFICATION; LABEL-FREE DETECTION; SWITCH-ON DETECTION; ULTRASENSITIVE ELECTROCHEMICAL DETECTION; TERMINAL DEOXYNUCLEOTIDYL TRANSFERASE; ASSISTED SIGNAL AMPLIFICATION; COLORIMETRIC DNA DETECTION; NUCLEIC-ACID APTAMERS; SPLIT G-QUADRUPLEX;
D O I
10.1016/j.aca.2016.01.043
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
With rapid advances in the field of DNA chemistry, nucleic acids and DNA-modifying enzymes have recently emerged as versatile components for the construction of oligonucleotide-based sensors. Meanwhile, the G-quadruplex motif has been widely employed for the development of DNA-based assays due to its diverse structural variety. In this tutorial, we introduce the principles of G-quadruplex-based sensing and the use of DNA-modifying enzymes for sensor platform development. We also highlight recent studies of the application of DNA-modifying enzymes for the development of G-quadruplex-based luminescent detection platforms with a view towards how those enzymes play an important role in sensitivity enhancement. (C) 2016 Elsevier B.V. All rights reserved.
引用
收藏
页码:41 / 54
页数:14
相关论文
共 159 条
[1]   Targeting G-quadruplexes in gene promoters: a novel anticancer strategy? [J].
Balasubramanian, Shankar ;
Hurley, Laurence H. ;
Neidle, Stephen .
NATURE REVIEWS DRUG DISCOVERY, 2011, 10 (04) :261-275
[2]   Design of fluorescent materials for chemical sensing [J].
Basabe-Desmonts, Lourdes ;
Reinhoudt, David N. ;
Crego-Calama, Mercedes .
CHEMICAL SOCIETY REVIEWS, 2007, 36 (06) :993-1017
[3]   Targeting G-quadruplex structures with extrinsic fluorogenic dyes: promising fluorescence sensors [J].
Bhasikuttan, Achikanath C. ;
Mohanty, Jyotirmayee .
CHEMICAL COMMUNICATIONS, 2015, 51 (36) :7581-7597
[4]   Dumbbell probe-mediated cascade isothermal amplification: A novel strategy for label-free detection of microRNAs and its application to real sample assay [J].
Bi, Sai ;
Cui, Yangyang ;
Li, Li .
ANALYTICA CHIMICA ACTA, 2013, 760 :69-74
[5]   Triggered Polycatenated DNA Scaffolds for DNA Sensors and Aptasensors by a Combination of Rolling Circle Amplification and DNAzyme Amplification [J].
Bi, Sai ;
Li, Li ;
Zhang, Shusheng .
ANALYTICAL CHEMISTRY, 2010, 82 (22) :9447-9454
[6]   Ultrasensitive and selective DNA detection based on nicking endonuclease assisted signal amplification and its application in cancer cell detection [J].
Bi, Sai ;
Zhang, Jilei ;
Zhang, Shusheng .
CHEMICAL COMMUNICATIONS, 2010, 46 (30) :5509-5511
[7]   Quadruplex DNA: sequence, topology and structure [J].
Burge, Sarah ;
Parkinson, Gary N. ;
Hazel, Pascale ;
Todd, Alan K. ;
Neidle, Stephen .
NUCLEIC ACIDS RESEARCH, 2006, 34 (19) :5402-5415
[8]   KINETIC-STUDIES OF THE HYDROLYSIS OF PLATINUM-DNA COMPLEXES BY NUCLEASE-S1 [J].
BUTOUR, JL ;
MAZARD, AM ;
VIEUSSENS, C ;
JOHNSON, NP .
CHEMICO-BIOLOGICAL INTERACTIONS, 1990, 73 (2-3) :195-205
[9]   Fluorophore-labeled β-lactamase as a biosensor for β-lactam antibiotics:: A study of the biosensing process [J].
Chan, Pak-Ho ;
So, Pui-Kin ;
Ma, Dik-Lung ;
Zhao, Yanxiang ;
Lai, Tat-Shing ;
Chung, Wai-Hong ;
Chan, Kwok-Chu ;
Yiu, Ka-Fai ;
Chan, Hoi-Wan ;
Siu, Fung-Ming ;
Tsang, Chun-Wai ;
Leung, Yun-Chung ;
Wong, Kwok-Yin .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2008, 130 (20) :6351-6361
[10]   An enhanced chemiluminescence resonance energy transfer system based on target recycling G-guadruplexes/hemin DNAzyme catalysis and its application in ultrasensitive detection of DNA [J].
Chen, Jia ;
Huang, Yong ;
Vdovenko, Marina ;
Sakharov, Ivan Yu ;
Su, Guifa ;
Zhao, Shulin .
TALANTA, 2015, 138 :59-63