Isolation and Purification of a New Kalimantacin/Batumin-Related Polyketide Antibiotic and Elucidation of Its Biosynthesis Gene Cluster

被引:70
作者
Mattheus, Wesley [1 ]
Gao, Ling-Jie [4 ]
Herdewijn, Piet [4 ]
Landuyt, Bart [2 ]
Verhaegen, Jan [3 ]
Masschelein, Joleen [1 ]
Volckaert, Guido [1 ]
Lavigne, Rob [1 ]
机构
[1] Katholieke Univ Leuven, Lab Gene Technol, B-3000 Louvain, Belgium
[2] Katholieke Univ Leuven, Anim Physiol & Neurobiol Sect, B-3000 Louvain, Belgium
[3] Katholieke Univ Leuven, Expt Med Lab, B-3000 Louvain, Belgium
[4] Katholieke Univ Leuven, Interface Valorizat Platform, B-3000 Louvain, Belgium
来源
CHEMISTRY & BIOLOGY | 2010年 / 17卷 / 02期
关键词
ALCALIGENES SP YL-02632S; ENZYMATIC DOMAINS; NATURAL-PRODUCT; CURACIN-A; PATHWAY; SYNTHASE; ORGANIZATION; MUPIROCIN; CARBAMOYLTRANSFERASE; IDENTIFICATION;
D O I
10.1016/j.chembiol.2010.01.014
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Kal/bat, a polyketide, isolated to high purity (>95%) is characterized by strong and selective antibacterial activity against Staphylococcus species (minimum inhibitory concentration, 0.05 mu g/mL), and no resistance was observed in strains already resistant to commonly used antibiotics. The kal/bat biosynthesis gene cluster was determined to a 62 kb genomic region of Pseudomonas fluorescens BCCM_ID9359. The kal/bat gene cluster consists of 16 open reading frames (ORF), encoding a hybrid PKS-NRPS system, extended with trans-acting tailoring functions. A full model for kal/bat biosynthesis is postulated and experimentally tested by gene inactivation, structural confirmation (using NMR spectroscopy), and complementation. The structural and microbiological study of biosynthetic kal/bat analogs revealed the importance of the carbamoyl group and 17-keto group for antibacterial activity. The mechanism of self-resistance lies within the production of an inactive intermediate, which is activated in a one-step enzymatic oxidation upon export. The genetic basis and biochemical elucidation of the biosynthesis pathway of this antibiotic will facilitate rational engineering for the design of novel structures with improved activities. This makes it a promising new therapeutic option to cope with multidrug-resistant clinical infections.
引用
收藏
页码:149 / 159
页数:11
相关论文
共 47 条
[1]   Organization of the biosynthetic gene cluster for rapamycin in Streptomyces hygroscopicus: Analysis of the enzymatic domains in the modular polyketide synthase [J].
Aparicio, JF ;
Molnar, I ;
Schwecke, T ;
Konig, A ;
Haydock, SF ;
Khaw, LE ;
Staunton, J ;
Leadlay, PF .
GENE, 1996, 169 (01) :9-16
[2]  
BAUER AW, 1966, AM J CLIN PATHOL, V45, P493
[3]  
Borodovsky Mark, 2003, Curr Protoc Bioinformatics, VChapter 4, DOI 10.1002/0471250953.bi0405s01
[4]   Polyunsaturated fatty-acid-like trans-enoyl reductases utilized in polyketide biosynthesis [J].
Bumpus, Stefanie B. ;
Magarvey, Nathan A. ;
Kelleher, Neil L. ;
Walsh, Christopher T. ;
Calderone, Christopher T. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2008, 130 (35) :11614-+
[5]   The stereochemistry of ketoreduction [J].
Caffrey, P .
CHEMISTRY & BIOLOGY, 2005, 12 (10) :1060-1062
[6]   Convergence of isoprene and polyketide biosynthetic machinery:: Isoprenyl-S-carrier proteins in the pksX pathway of Bacillus subtilis [J].
Calderone, Christopher T. ;
Kowtoniuk, Walter E. ;
Kelleher, Neil L. ;
Walsh, Christopher T. ;
Dorrestein, Pieter C. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (24) :8977-8982
[7]   Biosynthetic pathway and gene cluster analysis of curacin A, an antitubulin natural product from the tropical marine cyanobacterium Lyngbya majuscula [J].
Chang, ZX ;
Sitachitta, N ;
Rossi, JV ;
Roberts, MA ;
Flatt, PM ;
Jia, JY ;
Sherman, DH ;
Gerwick, WH .
JOURNAL OF NATURAL PRODUCTS, 2004, 67 (08) :1356-1367
[8]   Structural and functional characterization of three polyketide synthase gene clusters in Bacillus amyloliquefaciens FZB 42 [J].
Chen, Xiao-Hua ;
Vater, Joachim ;
Piel, Joern ;
Franke, Peter ;
Scholz, Romy ;
Schneider, Kathrin ;
Koumoutsi, Alexandra ;
Hitzeroth, Gabriele ;
Grammel, Nicolas ;
Strittmatter, Axel W. ;
Gottschalk, Gerhard ;
Suessmuth, Roderich D. ;
Borriss, Rainer .
JOURNAL OF BACTERIOLOGY, 2006, 188 (11) :4024-4036
[9]   CHARACTERIZATION OF THE CMCH GENES OF NOCARDIA LACTAMDURANS AND STREPTOMYCES-CLAVULIGERUS ENCODING A FUNCTIONAL 3'-HYDROXPMETHYLCEPHEM O-CARBAMOYLTRANSFERASE FOR CEPHAMYCIN BIOSYNTHESIS [J].
COQUE, JJR ;
PEREZLLARENA, FJ ;
ENGUITA, FJ ;
FUENTE, JL ;
MARTIN, JF ;
LIRAS, P .
GENE, 1995, 162 (01) :21-27
[10]  
CUNDLIFFE E, 1989, ANNU REV MICROBIOL, V43, P207, DOI 10.1146/annurev.micro.43.1.207