Passive sampling to scale wastewater surveillance of infectious disease: Lessons learned from COVID-19

被引:42
作者
Bivins, Aaron [1 ]
Kaya, Devrim [2 ]
Ahmed, Warish [3 ]
Brown, Joe [4 ]
Butler, Caitlyn [5 ]
Greaves, Justin [6 ]
Leal, Raeann [7 ]
Maas, Kendra [8 ]
Rao, Gouthami [4 ]
Sherchan, Samendra [9 ,10 ]
Sills, Deborah [11 ]
Sinclair, Ryan [7 ]
Wheeler, Robert T. [12 ,13 ]
Mansfeldt, Cresten [14 ,15 ]
机构
[1] Louisiana State Univ, Dept Civil & Environm Engn, 3255 Patrick F Taylor Hall, Baton Rouge, LA 70803 USA
[2] Oregon State Univ, Sch Chem Biol & Environm Engn, Corvallis, OR 97331 USA
[3] CSIRO Land & Water, Ecosci Precinct, 41 Boggo Rd, Dutton Pk, Qld 4102, Australia
[4] Univ N Carolina, Dept Environm Sci &, Gillings Sch Global Publ Hlth, Chapel Hill, NC 27599 USA
[5] Univ Massachusetts Amherst, Dept Civil & Environm Engn, 130 Nat Resources Rd, Amherst, MA 01003 USA
[6] Loyola Univ Chicago, Sch Environm Sustainabil, 6364 N Sheridan Rd, Chicago, IL 60660 USA
[7] Loma Linda Univ, Sch Publ Hlth, 24951 North Circle Dr, Loma Linda, CA 92354 USA
[8] Univ Connecticut, Microbial Analyses Resources & Serv Facil, Storrs, CT 06269 USA
[9] Tulane Univ, Dept Environm Hlth Sci, New Orleans, LA 70112 USA
[10] Morgan State Univ, Ctr Climate & Hlth, Baltimore, MD 21251 USA
[11] Bucknell Univ, Dept Civil & Environm Engn, Lewisburg, PA 17837 USA
[12] Univ Maine, Dept Mol & Biomed Sci, 5735 Hitchner Hall, Orono, ME 04469 USA
[13] Univ Maine, Grad Sch Biomed Sci & Engn, 5735 Hitchner Hall, Orono, ME 04469 USA
[14] Univ Colorado Boulder, Dept Civil Environm & Architectural Engn, 1111 Engn Dr, Boulder, CO 80309 USA
[15] Univ Colorado Boulder, Environm Engn Program, 4001 Discovery Dr, Boulder, CO 80303 USA
关键词
COVID-19; SARS-CoV-2; Wastewater-based epidemiology; Passive sampling; SEWAGE; COLLECTION; ADSORPTION; SARS-COV-2; NOROVIRUS; SURVIVAL; BACILLI; TYPE-1;
D O I
10.1016/j.scitotenv.2022.155347
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Much of what is known and theorized concerning passive sampling techniques has been developed considering chemical analytes. Yet, historically, biological analytes, such as Salmonella typhi, have been collected from wastewater via passive sampling with Moore swabs. In response to the COVID-19 pandemic, passive sampling is re-emerging as a promising technique to monitor SARS-CoV-2 RNA in wastewater. Method comparisons and disease surveillance using composite, grab, and passive sampling for SARS-CoV-2 RNA detection have found passive sampling with a variety of materials routinely produced qualitative results superior to grab samples and useful for sub-sewershed surveillance of COVID-19. Among individual studies, SARS-CoV-2 RNA concentrations derived from passive samplers demonstrated heterogeneous correlation with concentrations from paired composite samples ranging from weak (R2= 0.27, 0.31) to moderate (R2= 0.59) to strong (R2= 0.76). Among passive sampler materials, electronegative membranes have shown great promise with linear uptake of SARS-CoV-2 RNA observed for exposure durations of 24 to 48 h and in several cases RNA positivity on par with composite samples. Continuing development of passive sampling methods for the surveillance of infectious diseases via diverse forms of fecal waste should focus on optimizing sampler materials for the efficient uptake and recovery of biological analytes, kit-free extraction, and resourceefficient testing methods capable of rapidly producing qualitative or quantitative data. With such refinements passive sampling could prove to be a fundamental tool for scaling wastewater surveillance of infectious disease, especially among the 1.8 billion persons living in low-resource settings served by non-traditional wastewater collection infrastructure.
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页数:13
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共 95 条
  • [1] Minimizing errors in RT-PCR detection and quantification of SARS-CoV-2 RNA for wastewater surveillance
    Ahmed, Warish
    Simpson, Stuart L.
    Bertsch, Paul M.
    Bibby, Kyle
    Bivins, Aaron
    Blackall, Linda L.
    Bofill-Mas, Silvia
    Bosch, Albert
    Brandao, Joao
    Choi, Phil M.
    Ciesielski, Mark
    Donner, Erica
    D'Souza, Nishita
    Farnleitner, Andreas H.
    Gerrity, Daniel
    Gonzalez, Raul
    Griffith, John F.
    Gyawali, Pradip
    Haas, Charles N.
    Hamilton, Kerry A.
    Hapuarachchi, Hapuarachchige Chandithal
    Harwood, Valerie J.
    Haque, Rehnuma
    Jackson, Greg
    Khan, Stuart J.
    Khan, Wesaal
    Kitajima, Masaaki
    Korajkic, Asja
    La Rosa, Giuseppina
    Layton, Blythe A.
    Lipp, Erin
    McLellan, Sandra L.
    McMinn, Brian
    Medema, Gertjan
    Metcalfe, Suzanne
    Meijer, Wim G.
    Mueller, Jochen F.
    Murphy, Heather
    Naughton, Coleen C.
    Noble, Rachel T.
    Payyappat, Sudhi
    Petterson, Susan
    Pitkanen, Tarja
    Rajal, Veronica B.
    Reyneke, Brandon
    Roman, Fernando A., Jr.
    Rose, Joan B.
    Rusinol, Marta
    Sadowsky, Michael J.
    Sala-Comorera, Laura
    [J]. SCIENCE OF THE TOTAL ENVIRONMENT, 2022, 805
  • [2] First con firmed detection of SARS-CoV-2 in untreated wastewater in Australia: A proof of concept for the wastewater surveillance of COVID-19 in the community
    Ahmed, Warish
    Angel, Nicola
    Edson, Janette
    Bibby, Kyle
    Bivins, Aaron
    O'Brien, Jake W.
    Choi, Phil M.
    Kitajima, Masaaki
    Simpson, Stuart L.
    Li, Jiaying
    Tscharke, Ben
    Verhagen, Rory
    Smith, Wendy J. M.
    Zaugg, Julian
    Dierens, Leanne
    Hugenholtz, Philip
    Thomas, Kevin, V
    Mueller, Jochen F.
    [J]. SCIENCE OF THE TOTAL ENVIRONMENT, 2020, 728
  • [3] Characterization and Application of Passive Samplers for Monitoring of Pesticides in Water
    Ahrens, Lutz
    Daneshvar, Atlasi
    Lau, Anna E.
    Kreuger, Jenny
    [J]. JOVE-JOURNAL OF VISUALIZED EXPERIMENTS, 2016, (114):
  • [4] Sewage Systems Surveillance for SARS-CoV-2: Identification of Knowledge Gaps, Emerging Threats, and Future Research Needs
    Amereh, Fatemeh
    Negahban-Azar, Masoud
    Isazadeh, Siavash
    Dabiri, Hossein
    Masihi, Najmeh
    Jahangiri-rad, Mahsa
    Rafiee, Mohammad
    [J]. PATHOGENS, 2021, 10 (08):
  • [5] RT-LAMP: A Cheaper, Simpler and Faster Alternative for the Detection of SARS-CoV-2 in Wastewater
    Amoah, Isaac Dennis
    Mthethwa, Nonsikelelo Precios
    Pillay, Leanne
    Deepnarain, Nashia
    Pillay, Kriveshin
    Awolusi, Oluyemi Olatunji
    Kumari, Sheena
    Bux, Faizal
    [J]. FOOD AND ENVIRONMENTAL VIROLOGY, 2021, 13 (04) : 447 - 456
  • [6] [Anonymous], 2014, PLOS ONE, V11, DOI [10.1371/journal.pone.0152251, DOI 10.1371/JOURNAL.PONE.0152251]
  • [7] USE OF MOORE SWABS FOR ISOLATING VIBRIO-CHOLERAE FROM SEWAGE
    BARRETT, TJ
    BLAKE, PA
    MORRIS, GK
    PUHR, ND
    BRADFORD, HB
    WELLS, JG
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 1980, 11 (04) : 385 - 388
  • [8] Basu Paramita, 2022, Access Microbiol, V4, P000318, DOI 10.1099/acmi.0.000318
  • [9] Safely Managed Sanitation for All Means Fecal Sludge Management for At Least 1.8 Billion People in Low and Middle Income Countries
    Berendes, David M.
    Sumner, Trent A.
    Brown, Joe M.
    [J]. ENVIRONMENTAL SCIENCE & TECHNOLOGY, 2017, 51 (05) : 3074 - 3083
  • [10] COVID-19 containment on a college campus via wastewater-based epidemiology, targeted clinical testing and an intervention
    Betancourt, Walter Q.
    Schmitz, Bradley W.
    Innes, Gabriel K.
    Prasek, Sarah M.
    Brown, Kristen M. Pogreba
    Stark, Erika R.
    Foster, Aidan R.
    Sprissler, Ryan S.
    Harris, David T.
    Sherchan, Samendra P.
    Gerba, Charles P.
    Pepper, Ian L.
    [J]. SCIENCE OF THE TOTAL ENVIRONMENT, 2021, 779