Photobacterium sanctipauli sp nov isolated from bleached Madracis decactis (Scleractinia) in the St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil

被引:15
|
作者
Moreira, Ana Paula B. [1 ]
Duytschaever, Gwen [1 ]
Chimetto Tonon, Luciane A. [1 ]
Froes, Adriana M. [1 ]
de Oliveira, Louisi S. [1 ]
Amado-Filho, Gilberto M. [2 ]
Francini-Filho, Ronaldo B. [3 ]
De Vos, Paul [4 ,5 ]
Swings, Jean [4 ,5 ]
Thompson, Cristiane C. [1 ]
Thompson, Fabiano L. [1 ,6 ]
机构
[1] Univ Fed Rio de Janeiro, Inst Biol, Rio De Janeiro, Brazil
[2] Bot Garden Res Inst JBRJ, Rio De Janeiro, Brazil
[3] Fed Univ Paraiba UFPB, Dept Environm & Engn, Paraiba, Brazil
[4] Univ Ghent, BCCM LMG Bacteria Collect, B-9000 Ghent, Belgium
[5] Univ Ghent, Fac Sci, Microbiol Lab, B-9000 Ghent, Belgium
[6] Univ Fed Rio de Janeiro, COPPE, SAGE, Lab Sistemas Avancados Gestao Prod, BR-21945 Rio De Janeiro, Brazil
来源
PEERJ | 2014年 / 2卷
关键词
Photobacterium sanctipauli; St Paul's rocks; Coral bleaching; New species; Genomic taxonomy; GENOMIC DIVERSITY; BACTERIUM; SEA; VIBRIOS; TAXONOMY; IDENTIFICATION; PHYLOGENY; SEDIMENT;
D O I
10.7717/peerj.427
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Five novel strains of Photobacterium (A-394T, A-373, A-379, A-397 and A-398) were isolated from bleached coralMadracis decactis (scleractinian) in the remote St Peter & St Archipelago (SPSPA), Mid-Atlantic Ridge, Brazil. Healthy M. decactis specimens were also surveyed, but no strains were related to them. The novel isolates formed a distinct lineage based on the 16S rRNA, recA, and rpoA gene sequences analysis. Their closest phylogenetic neighbours were Photobacterium rosenbergii, P. gaetbulicola, and P. lutimaris, sharing 96.6 to 95.8% 16S rRNA gene sequence similarity. The novel species can be differentiated from the closest neighbours by several phenotypic and chemotaxonomic markers. It grows at pH 11, produces tryptophane deaminase, presents the fatty acid C-18:0, but lacks C-16:0 iso. The whole cell protein profile, based in MALDI-TOF MS, distinguished the strains of the novel species among each other and from the closest neighbors. In addition, we are releasing the whole genome sequence of the type strain. The name Photobacterium sanctipauli sp. nov. is proposed for this taxon. The G + C content of the type strain A-394(T) (=LMG27910(T) = CAIM1892(T)) is 48.2 mol%.
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页数:14
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