Association mapping for yield and yield-contributing traits in barley under drought conditions with genome-based SSR markers

被引：20
作者：
Abou-Elwafa, Salah Fatouh [1 ]
机构：
[1] Assiut Univ, Fac Agr, Dept Agron, Assiut 71526, Egypt
来源：
COMPTES RENDUS BIOLOGIES | 2016年 / 339卷 / 5-6期
关键词：
Association mapping; Drought; Barley; Hordeum; SSR markers; SIMPLE SEQUENCE REPEATS; LINKAGE DISEQUILIBRIUM; WILD BARLEY; QTL ANALYSIS; GENETIC DIVERSITY; AGRONOMIC TRAITS; CONSENSUS MAP; VULGARE; TOLERANCE; POPULATION;
D O I：
10.1016/j.crvi.2016.03.001
中图分类号：
Q [生物科学];
学科分类号：
07 ; 0710 ; 09 ;
摘要：
Drought negatively affects plant development, growth, yield, and ultimately production of crop species. Association analysis of yield and yield-contributing traits was conducted for a barley germplasm collection consisting 107 wild (Hordeum spontaneum L.) genotypes, originating from 12 countries using 76 SSR markers. Phenotypic evaluations were performed for days to heading, plant height, number of tillers/plant, spike length, thousand kernel weight, single plant yield under well-watered and drought-stress conditions. Highly significant differences between well-watered and drought-stress conditions were observed in all measured traits. Association analysis revealed a total of 83 significant marker-trait associations for all six measured traits. The results revealed that several chromosomal regions significantly influence more than one trait, suggesting a possible existence of pleiotropic or indirect effects. The phenotypic variation explained by individual marker-trait associations ranged from 5.08 to 27.84%. The results demonstrated that wild barley is a valuable source for improving yield and yield-contributing traits for drought tolerance. Our data provide a tool kit for the potential application of marker-assisted selection for drought tolerance in barley. (C) 2016 Academie des sciences. Published by Elsevier Masson SAS. All rights reserved.
引用
收藏
页码：153 / 162
页数：10
相关论文
共 46 条
  • [1] Association mapping for drought tolerance in barley at the reproductive stage
    Abou-Elwafa, Salah Fatouh
    [J]. COMPTES RENDUS BIOLOGIES, 2016, 339 (02) : 51 - 59
  • [2] Quantitative Trait Loci Associated with Agronomic Traits of Barley (Hordeum vulgare L.)
    Akash, Muhanad Walid
    [J]. JOURNAL OF CROP IMPROVEMENT, 2014, 28 (03) : 390 - 405
  • [3] QTLs for agronomic traits in the Mediterranean environment identified in recombinant inbred lines of the cross 'Arta' x H-spontaneum 41-1
    Baum, M
    Grando, S
    Backes, G
    Jahoor, A
    Sabbagh, A
    Ceccarelli, S
    [J]. THEORETICAL AND APPLIED GENETICS, 2003, 107 (07) : 1215 - 1225
  • [4] Ceccarelli, 2010, ENCY BIOTECHNOL AGR, V1, P205
  • [5] CECCARELLI S, 1987, Genetica Agraria, V41, P131
  • [6] Drought as a challenge for the plant breeder
    Ceccarelli, S
    Grando, S
    [J]. PLANT GROWTH REGULATION, 1996, 20 (02) : 149 - 155
  • [7] Mapping adaptation of barley to droughted environments
    Comadran, J.
    Russell, J. R.
    van Eeuwijk, F. A.
    Ceccarelli, S.
    Grando, S.
    Baum, M.
    Stanca, A. M.
    Pecchioni, N.
    Mastrangelo, A. M.
    Akar, T.
    Al-Yassin, A.
    Benbelkacem, A.
    Choumane, W.
    Ouabbou, H.
    Dahan, R.
    Bort, J.
    Araus, J. -L.
    Pswarayi, A.
    Romagosa, I.
    Hackett, C. A.
    Thomas, W. T. B.
    [J]. EUPHYTICA, 2008, 161 (1-2) : 35 - 45
  • [8] Mixed model association scans of multi-environmental trial data reveal major loci controlling yield and yield related traits in Hordeum vulgare in Mediterranean environments
    Comadran, J.
    Russell, J. R.
    Booth, A.
    Pswarayi, A.
    Ceccarelli, S.
    Grando, S.
    Stanca, A. M.
    Pecchioni, N.
    Akar, T.
    Al-Yassin, A.
    Benbelkacem, A.
    Ouabbou, H.
    Bort, J.
    van Eeuwijk, F. A.
    Thomas, W. T. B.
    Romagosa, I.
    [J]. THEORETICAL AND APPLIED GENETICS, 2011, 122 (07) : 1363 - 1373
  • [9] Patterns of genetic diversity and linkage disequilibrium in a highly structured Hordeum vulgare association-mapping population for the Mediterranean basin
    Comadran, Jordi
    Thomas, W. T. B.
    van Eeuwijk, F. A.
    Ceccarelli, S.
    Grando, S.
    Stanca, A. M.
    Pecchioni, N.
    Akar, T.
    Al-Yassin, A.
    Benbelkacem, A.
    Ouabbou, H.
    Bort, J.
    Romagosa, I.
    Hackett, C. A.
    Russell, J. R.
    [J]. THEORETICAL AND APPLIED GENETICS, 2009, 119 (01) : 175 - 187
  • [10] Mapping and analysis of quantitative trait loci in experimental populations
    Doerge, RW
    [J]. NATURE REVIEWS GENETICS, 2002, 3 (01) : 43 - 52
12345