Controlled Ligand Exchange Between Ruthenium Organometallic Cofactor Precursors and a Naive Protein Scaffold Generates Artificial Metalloenzymes Catalysing Transfer Hydrogenation

被引:6
作者
Biggs, George S. [1 ]
Klein, Oskar James [1 ,2 ]
Maslen, Sarah L. [3 ]
Skehel, J. Mark [3 ]
Rutherford, Trevor J. [3 ]
Freund, Stefan M. V. [3 ]
Hollfelder, Florian [2 ]
Boss, Sally R. [1 ]
Barker, Paul D. [1 ]
机构
[1] Univ Cambridge, Dept Chem, Lensfield Rd, Cambridge CB2 1EW, England
[2] Univ Cambridge, Dept Biochem, Tennis Court Rd, Cambridge CB2 1GA, England
[3] MRC Lab Mol Biol, Francis Crick Ave,Cambridge Biomed Campus, Cambridge CB2 0QH, England
基金
英国医学研究理事会; 英国工程与自然科学研究理事会;
关键词
direct coordination; ligand exchange; metalloenzymes; ruthenium; transfer hydrogenation; DIRECTED EVOLUTION; CATALYSIS; DESIGN; COMPLEXES; CHEMISTRY; KINETICS; BINDING; KETONES; HYDROFORMYLATION; STREPTAVIDIN;
D O I
10.1002/anie.202015834
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Many natural metalloenzymes assemble from proteins and biosynthesised complexes, generating potent catalysts by changing metal coordination. Here we adopt the same strategy to generate artificial metalloenzymes (ArMs) using ligand exchange to unmask catalytic activity. By systematically testing Ru-II(eta(6)-arene)(bipyridine) complexes designed to facilitate the displacement of functionalised bipyridines, we develop a fast and robust procedure for generating new enzymes via ligand exchange in a protein that has not evolved to bind such a complex. The resulting metal cofactors form peptidic coordination bonds but also retain a non-biological ligand. Tandem mass spectrometry and F-19 NMR spectroscopy were used to characterise the organometallic cofactors and identify the protein-derived ligands. By introduction of ruthenium cofactors into a 4-helical bundle, transfer hydrogenation catalysts were generated that displayed a 35-fold rate increase when compared to the respective small molecule reaction in solution.
引用
收藏
页码:10919 / 10927
页数:9
相关论文
共 76 条
[1]   The solution structure of oxidized Escherichia coli cytochrome b562 [J].
Arnesano, F ;
Banci, L ;
Bertini, I ;
Faraone-Mennella, J ;
Rosato, A ;
Barker, PD ;
Fersht, AR .
BIOCHEMISTRY, 1999, 38 (27) :8657-8670
[2]   The many faces of vitamin B12:: Catalysis by cobalamin-dependent enzymes [J].
Banerjee, R ;
Ragsdale, SW .
ANNUAL REVIEW OF BIOCHEMISTRY, 2003, 72 :209-247
[3]   CONVERSION OF CYTOCHROME B(562) TO C-TYPE CYTOCHROMES [J].
BARKER, PD ;
NEROU, EP ;
FREUND, SMV ;
FEARNLEY, IM .
BIOCHEMISTRY, 1995, 34 (46) :15191-15203
[4]  
Bertucci C, 2002, ADV SYNTH CATAL, V344, P556, DOI 10.1002/1615-4169(200207)344:5<556::AID-ADSC556>3.0.CO
[5]  
2-E
[6]   Unlocking the Full Evolutionary Potential of Artificial Metalloenzymes Through Direct Metal-Protein Coordination A review of recent advances for catalyst development [J].
Biggs, George S. ;
Klein, Oskar James ;
Boss, Sally R. ;
Barker, Paul D. .
JOHNSON MATTHEY TECHNOLOGY REVIEW, 2020, 64 (04) :407-418
[7]   Use of a fluorinated probe to quantitatively monitor amino acid binding preferences of ruthenium(ii) arene complexes [J].
Biggs, George S. ;
O'Neill, Michael J. ;
Mendez, Pablo Carames ;
Scrase, Thomas G. ;
Lin, Yulu ;
Bin-Maarof, Amzar Muzani ;
Bond, Andrew D. ;
Boss, Sally R. ;
Barker, Paul D. .
DALTON TRANSACTIONS, 2019, 48 (20) :6910-6920
[8]   Supramolecular Assembly of Artificial Metalloenzymes Based on the Dimeric Protein LmrR as Promiscuous Scaffold [J].
Bos, Jeffrey ;
Browne, Wesley R. ;
Driessen, Arnold J. M. ;
Roelfes, Gerard .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2015, 137 (31) :9796-9799
[9]   Optimizing non-natural protein function with directed evolution [J].
Brustad, Eric M. ;
Arnold, Frances H. .
CURRENT OPINION IN CHEMICAL BIOLOGY, 2011, 15 (02) :201-210
[10]   A Pressure Test to Make 10 Molecules in 90 Days: External Evaluation of Methods to Engineer Biology [J].
Casini, Arturo ;
Chang, Fang-Yuan ;
Eluere, Raissa ;
King, Andrew M. ;
Young, Eric M. ;
Dudley, Quentin M. ;
Karim, Ashty ;
Pratt, Katelin ;
Bristol, Cassandra ;
Forget, Anthony ;
Ghodasara, Amar ;
Warden-Rothman, Robert ;
Gan, Rui ;
Cristofaro, Alexander ;
Borujeni, Amin Espah ;
Ryu, Min-Hyung ;
Li, Jian ;
Kwon, Yong-Chan ;
Wang, He ;
Tatsis, Evangelos ;
Rodriguez-Lopez, Carlos ;
O'Connor, Sarah ;
Medema, Marnix H. ;
Fischbach, Michael A. ;
Jewett, Michael C. ;
Voigt, Christopher ;
Gordon, D. Benjamin .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2018, 140 (12) :4302-4316