DHNet: High-resolution and hierarchical network for cross-domain OCT speckle noise reduction

被引:0
作者
Zhou, Yi [1 ]
Li, Jiang [2 ]
Wang, Meng [1 ]
Peng, Yuanyuan [1 ]
Chen, Zhongyue [1 ]
Zhu, Weifang [1 ]
Shi, Fei [1 ]
Wang, Lianyu [1 ]
Wang, Tingting [1 ]
Yao, Chenpu [1 ]
Chen, Xinjian [1 ,3 ]
机构
[1] Soochow Univ, Sch Elect & Informat Engn, 1 Shizi St, Suzhou 215006, Jiangsu, Peoples R China
[2] Old Dominion Univ, Dept Elect & Comp Engn, Norfolk, VA USA
[3] Soochow Univ, State Key Lab Radiat Med & Protect, Suzhou, Jiangsu, Peoples R China
关键词
domain adaptation; generative adversarial networks; OCT speckle noise reduction; OPTICAL COHERENCE TOMOGRAPHY; IMAGES; REPRESENTATION; SUPPRESSION; FILTER; SKIN;
D O I
10.1002/mp.15712
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
Purpose Optical coherence tomography (OCT) imaging uses the principle of Michelson interferometry to obtain high-resolution images by coherent superposing of multiple forward and backward scattered light waves with random phases. This process inevitably produces speckle noise that severely compromises visual quality of OCT images and degrades performances of subsequent image analysis tasks. In addition, datasets obtained by different OCT scanners have distribution shifts, making a speckle noise suppression model difficult to be generalized across multiple datasets. In order to solve the above issues, we propose a novel end-to-end denoising framework for OCT images collected by different scanners. Methods The proposed model utilizes the high-resolution network (HRNet) as backbone for image restoration, which reconstructs high-fidelity images by maintaining high-resolution representations throughout the entire learning process. To compensate distribution shifts among datasets collected by different scanners, we develop a hierarchical adversarial learning strategy for domain adaption. The proposed model is trained using datasets with clean ground truth produced by two commercial OCT scanners, and then applied to suppress speckle noise in OCT images collected by our recently developed OCT scanner, BV-1000 (China Bigvision Corporation). We name the proposed model as DHNet (Double-H-Net, High-resolution and Hierarchical Network). Results We compare DHNet with state-of-the-art methods and experiment results show that DHNet improves signal-to-noise ratio by a large margin of 18.137 dB as compared to the best of our previous method. In addition, DHNet achieves a testing time of 25 ms, which satisfies the real-time processing requirement for the BV-1000 scanner. We also conduct retinal layer segmentation experiment on OCT images before and after denoising and show that DHNet can also improve segmentation. Conclusions The proposed DHNet can compensate domain shifts between different data sets while significantly improve speckle noise suppression. The HRNet backbone is utilized to carry low- and high-resolution information to recover fidelity images. Domain adaptation is achieved by a hierarchical module through adversarial learning. In addition, DHNet achieved a testing time of 25 ms, which satisfied the real-time processing requirement.
引用
收藏
页码:5914 / 5928
页数:15
相关论文
共 54 条
  • [1] Effective speckle noise suppression in optical coherence tomography images using nonlocal means denoising filter with double Gaussian anisotropic kernels
    Aum, Jaehong
    Kim, Ji-hyun
    Jeong, Jichai
    [J]. APPLIED OPTICS, 2015, 54 (13) : D43 - D50
  • [2] Imaging of basal cell carcinoma by high-definition optical coherence tomography: histomorphological correlation. A pilot study
    Boone, M. A. L. M.
    Norrenberg, S.
    Jemec, G. B. E.
    Del Marmol, V.
    [J]. BRITISH JOURNAL OF DERMATOLOGY, 2012, 167 (04) : 856 - 864
  • [3] Stochastic speckle noise compensation in optical coherence tomography using non-stationary spline-based speckle noise modelling
    Cameron, Andrew
    Lui, Dorothy
    Boroomand, Ameneh
    Glaister, Jeffrey
    Wong, Alexander
    Bizheva, Kostadinka
    [J]. BIOMEDICAL OPTICS EXPRESS, 2013, 4 (09): : 1769 - 1785
  • [4] Cao, 2012, SPRING C ENG TECHNOL, P14, DOI DOI 10.1109/SCET.2012.6341990
  • [5] Speckle Reduction in 3D Optical Coherence Tomography of Retina by A-Scan Reconstruction
    Cheng, Jun
    Tao, Dacheng
    Quan, Ying
    Wong, Damon Wing Kee
    Cheung, Gemmy Chui Ming
    Akiba, Masahiro
    Liu, Jiang
    [J]. IEEE TRANSACTIONS ON MEDICAL IMAGING, 2016, 35 (10) : 2270 - 2279
  • [6] Speckle reduction in optical coherence tomography images of human finger skin by wavelet modified BM3D filter
    Chong, Bo
    Zhu, Yong-Kai
    [J]. OPTICS COMMUNICATIONS, 2013, 291 : 461 - 469
  • [7] Image denoising by sparse 3-D transform-domain collaborative filtering
    Dabov, Kostadin
    Foi, Alessandro
    Katkovnik, Vladimir
    Egiazarian, Karen
    [J]. IEEE TRANSACTIONS ON IMAGE PROCESSING, 2007, 16 (08) : 2080 - 2095
  • [8] MEASURES OF THE AMOUNT OF ECOLOGIC ASSOCIATION BETWEEN SPECIES
    DICE, LR
    [J]. ECOLOGY, 1945, 26 (03) : 297 - 302
  • [9] Denoising Prior Driven Deep Neural Network for Image Restoration
    Dong, Weisheng
    Wang, Peiyao
    Yin, Wotao
    Shi, Guangming
    Wu, Fangfang
    Lu, Xiaotong
    [J]. IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 2019, 41 (10) : 2305 - 2318
  • [10] Single-shot speckle noise reduction by interleaved optical coherence tomography
    Duan, Lian
    Lee, Hee Yoon
    Lee, Gary
    Agrawal, Monica
    Smith, Gennifer T.
    Ellerbee, Audrey K.
    [J]. JOURNAL OF BIOMEDICAL OPTICS, 2014, 19 (12)