Genome-wide association analysis of cognitive function in Danish long-lived individuals

被引:3
|
作者
Nygaard, Marianne [1 ,2 ,3 ]
Dowsett, Joseph [1 ,2 ,4 ]
McGue, Matt [1 ,2 ,5 ]
Christensen, Kaare [1 ,2 ,3 ,6 ]
Christiansen, Lene [1 ,2 ,4 ]
Tan, Qihua [1 ,2 ,3 ]
Mengel-From, Jonas [1 ,2 ,3 ]
机构
[1] Univ Southern Denmark, Danish Twin Registry, JB Winsloews Vej 9B, DK-5000 Odense C, Denmark
[2] Univ Southern Denmark, Danish Aging Res Ctr, Dept Publ Hlth, JB Winsloews Vej 9B, DK-5000 Odense C, Denmark
[3] Odense Univ Hosp, Dept Clin Genet, JB Winsloews Vej 4, DK-5000 Odense C, Denmark
[4] Copenhagen Univ Hosp, Rigshosp, Dept Clin Immunol, Blegdamsvej 9, DK-2100 Copenhagen OE, Denmark
[5] Univ Minnesota, Dept Psychol, 75 East River Rd, Minneapolis, MN 55455 USA
[6] Odense Univ Hosp, Dept Clin Biochem & Pharmacol, Klovervaenget 47, DK-5000 Odense C, Denmark
关键词
Cognitive function; Long-lived individuals; Genome-wide association study; Gene-based analysis; Pathway analysis; ALZHEIMERS-DISEASE; COHORTS BORN; METAANALYSIS; LOCI; HERITABILITY; EXPRESSION; GENE; ABILITY; PLINK; OLDER;
D O I
10.1016/j.mad.2021.111463
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Cognitive function is a substantially heritable trait related to numerous important life outcomes. Several genomewide association studies of cognitive function have in recent years led to the identification of thousands of significantly associated loci and genes. Individuals included in these studies have rarely been nonagenarians and centenarians, and since cognitive function is an important component of quality of life for this rapidly expanding demographic group, there is a need to explore genetic factors associated with individual differences in cognitive function at advanced ages. In this study, we pursued this by performing a genome-wide association study of cognitive function in 490 long-lived Danes (age range 90.1-100.8 years). While no genome-wide significant SNPs were identified, suggestively significant SNPs (P < 1 x 10(-5)) were mapped to several interesting genes, including ZWINT, CELF2, and DNAH5, and the glutamate receptor genes GRID2 and GRM7. Additionally, results from a gene set overrepresentation analysis indicated potential roles of gene sets related to G protein-coupled receptor (GPCR) signaling, interaction between L1 and ankyrins, mitogen-activated protein kinase (MAPK) signaling, RNA degradation, and cell cycle. Larger studies are needed to shed further light on the possible importance of these suggestive genes and pathways in cognitive function in nonagenarians and centenarians.
引用
收藏
页数:9
相关论文
共 50 条
  • [21] Genome-wide association studies and resting heart rate
    Kilpelainen, Tuomas O.
    JOURNAL OF ELECTROCARDIOLOGY, 2016, 49 (06) : 860 - 863
  • [22] Statistical analysis for genome-wide association study
    Zeng, Ping
    Zhao, Yang
    Qian, Cheng
    Zhang, Liwei
    Zhang, Ruyang
    Gou, Jianwei
    Liu, Jin
    Liu, Liya
    Chen, Feng
    JOURNAL OF BIOMEDICAL RESEARCH, 2015, 29 (04): : 285 - 297
  • [23] Statistical analysis for genome-wide association study
    Ping Zeng
    Yang Zhao
    Cheng Qian
    Liwei Zhang
    Ruyang Zhang
    Jianwei Gou
    Jin Liu
    Liya Liu
    Feng Chen
    The Journal of Biomedical Research, 2015, 29 (04) : 285 - 297
  • [24] REPLICABILITY ANALYSIS FOR GENOME-WIDE ASSOCIATION STUDIES
    Heller, Ruth
    Yekutieli, Daniel
    ANNALS OF APPLIED STATISTICS, 2014, 8 (01) : 481 - 498
  • [25] A genome-wide association study of thyroid stimulating hormone and free thyroxine in Danish children and adolescents
    Nielsen, Tenna Ruest Haarmark
    Appel, Emil Vincent Rosenbaum
    Svendstrup, Mathilde
    Ohrt, Johanne Dam
    Dahl, Maria
    Fonvig, Cilius Esmann
    Hollensted, Mette
    Have, Christian Theil
    Kadarmideen, Haja N.
    Pedersen, Oluf
    Hansen, Torben
    Holm, Jens-Christian
    Grarup, Niels
    PLOS ONE, 2017, 12 (03):
  • [26] Genome-wide pathway analysis of a genome-wide association study on psoriasis and Behcet's disease
    Lee, Young Ho
    Choi, Sung Jae
    Ji, Jong Dae
    Song, Gwan Gyu
    MOLECULAR BIOLOGY REPORTS, 2012, 39 (05) : 5953 - 5959
  • [27] Genome-wide association study for conformation traits in three Danish pig breeds
    Le, Thu H.
    Christensen, Ole F.
    Nielsen, Bjarne
    Sahana, Goutam
    GENETICS SELECTION EVOLUTION, 2017, 49
  • [28] Genome-wide association study for methane emission traits in Danish Holstein cattle
    Manzanilla-Pech, C. I., V
    Difford, G. F.
    Sahana, G.
    Rome, H.
    Lovendahl, P.
    Lassen, J.
    JOURNAL OF DAIRY SCIENCE, 2022, 105 (02) : 1357 - 1368
  • [29] Novel DNA methylation marker discovery by assumption-free genome-wide association analysis of cognitive function in twins
    Mohammadnejad, Afsaneh
    Soerensen, Mette
    Baumbach, Jan
    Mengel-From, Jonas
    Li, Weilong
    Lund, Jesper
    Li, Shuxia
    Christiansen, Lene
    Christensen, Kaare
    Hjelmborg, Jacob V. B.
    Tan, Qihua
    AGING CELL, 2021, 20 (02)
  • [30] Susceptibility to Childhood Pneumonia: A Genome-Wide Analysis
    Hayden, Lystra P.
    Cho, Michael H.
    McDonald, Merry-Lynn N.
    Crapo, James D.
    Beaty, Terri H.
    Silverman, Edwin K.
    Hersh, Craig P.
    AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY, 2017, 56 (01) : 20 - 28