Phenomics, genomics of oil palm (Elaeis guineensis Jacq.): way forward for making sustainable and high yielding quality oil palm

被引:13
作者
Babu, B. Kalyana [1 ]
Mathur, R. K. [1 ]
Anitha, P. [1 ]
Ravichandran, G. [1 ]
Bhagya, H. P. [1 ]
机构
[1] ICAR Indian Inst Oil Palm Res, Pedavegi 534450, Andhra Pradesh, India
关键词
Elaeis guineensis; Genomics assisted breeding; Genomic selection; Speed breeding; High yielding quality oil palm; ABIOTIC STRESS TOLERANCE; QUANTITATIVE TRAIT LOCI; POSITIVE REGULATOR; SELECTION; IDENTIFICATION; DISEASE; MARKERS; PREDICTION; DIVERSITY; DENSITY;
D O I
10.1007/s12298-021-00964-w
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Oil palm (Elaeis guineensis Jacq.) is a heterogeneous, perennial crop having long breeding cycle with a genome size of 1.8 Gb. The demand for vegetable oil is steadily increasing, and expected that nearly 240-250 million tons of vegetable oil may be required by 2050. Genomics and next generation technologies plays crucial role in achieving the sustainable availability of oil palm with good yield and high quality. A successful breeding programme in oil palm depends on the availability of diverse gene pool, ex-situ conservation and their proper utilization for generating elite planting material. The major breeding methods adopted in oil palm are either modified recurrent selection or the modified reciprocal recurrent selection method. The QTLs of yield and related traits are chiefly located on chromosome 4, 10, 12 and 15 which is discussed in the current review. The probable chromosomal regions influencing the less height increment is observed to be on chromosomes 4, 10, 14 and 15. Advanced genomic approaches together with bioinformatics tools were discussed thoroughly for achieving sustainable oil palm where more efforts are needed. Major emphasis is given on oil palm crop improvement using holistic approaches of various genomic tools. Also a road map given on the milestones in the genomics and way forward for making oil palm to high yielding quality oil palm.
引用
收藏
页码:587 / 604
页数:18
相关论文
共 101 条
[1]   Differential expression of oil palm pathology genes during interactions with Ganoderma boninense and Trichoderma harzianum [J].
Alizadeh, Fahimeh ;
Abdullah, Siti Nor Akmar ;
Khodavandi, Alireza ;
Abdullah, Faridah ;
Yusuf, Umi Kalsom ;
Chong, Pei Pei .
JOURNAL OF PLANT PHYSIOLOGY, 2011, 168 (10) :1106-1113
[2]  
[Anonymous], 1976, **DROPPED REF**
[3]  
[Anonymous], 2016, THAI J SCI TECHNOL
[4]   Genetic variability analysis and selection of pisifera palms for commercial production of high yielding and dwarf oil palm planting materials [J].
Arolu, Ibrahim Wasiu ;
Rafii, Mohd Y. ;
Marjuni, Marhalil ;
Hanafi, Mohamed M. ;
Sulaiman, Zulkefly ;
Rahim, Harun A. ;
Kolapo, Olalekan Kazeem ;
Abidin, Mohd Isa Zainol ;
Amiruddin, Mohd Din ;
Din, Ahmad Kushairi ;
Nookiah, Rajanaidu .
INDUSTRIAL CROPS AND PRODUCTS, 2016, 90 :135-141
[5]   Ergosterol analyses of oil palm seedlings and plants infected with Ganoderma [J].
As'wad, A. W. Mohd ;
Sariah, M. ;
Paterson, R. R. M. ;
Abidin, M. A. Zainal ;
Lima, N. .
CROP PROTECTION, 2011, 30 (11) :1438-1442
[6]   Analysis of the allelic variation in the Shell gene homolog of E. oleifera and design of species specific Shell primers [J].
Astorkia, Maider ;
Hernandez, Monica ;
Bocs, Stephanie ;
Ponce, Kevin ;
Leon, Olga ;
Morales, Shone ;
Quezada, Nathalie ;
Orellana, Francisco ;
Wendra, Fahmi ;
Sembiring, Zulhermana ;
Asmono, Dwi ;
Ritter, Enrique .
EUPHYTICA, 2020, 216 (01)
[7]   Association Mapping between Candidate Gene SNP and Production and Oil Quality Traits in Interspecific Oil Palm Hybrids [J].
Astorkia, Maider ;
Hernandez, Monica ;
Bocs, Stephanie ;
Lopez de Armentia, Emma ;
Herran, Ana ;
Ponce, Kevin ;
Leon, Olga ;
Morales, Shone ;
Quezada, Nathalie ;
Orellana, Francisco ;
Wendra, Fahmi ;
Sembiring, Zulhermana ;
Asmono, Dwi ;
Ritter, Enrique .
PLANTS-BASEL, 2019, 8 (10)
[8]  
BABU B, 2020, GENOMICS
[9]   Genome-wide association study for leaf area, rachis length and total dry weight in oil palm (Eleaeisguineensis) using genotyping by sequencing [J].
Babu, B. Kalyana ;
Mathur, R. K. ;
Ravichandran, G. ;
Anitha, P. ;
Venu, M. V. B. .
PLOS ONE, 2019, 14 (08)
[10]   Genome-wide association study (GWAS) for stem height increment in oil palm (Elaeis guineensis) germplasm using SNP markers [J].
Babu, B. Kalyana ;
Mathur, R. K. ;
Ravichandran, G. ;
Venu, M. V. B. .
TREE GENETICS & GENOMES, 2019, 15 (03)