Simulating Monovalent and Divalent Ions in Aqueous Solution Using a Drude Polarizable Force Field

被引:386
作者
Yu, Haibo [1 ]
Whitfield, Troy W. [2 ]
Harder, Edward [1 ]
Lamoureux, Guillaume [3 ]
Vorobyov, Igor [4 ]
Anisimov, Victor M. [4 ]
MacKerell, Alexander D., Jr. [4 ]
Roux, Benoit [1 ,2 ]
机构
[1] Univ Chicago, Dept Biochem & Mol Biol, Chicago, IL 60637 USA
[2] Argonne Natl Lab, Biosci Div, Argonne, IL 60649 USA
[3] Concordia Univ, Dept Chem & Biochem, Montreal, PQ H4B 1R6, Canada
[4] Univ Maryland, Sch Pharm, Dept Pharmaceut Sci, Baltimore, MD 21201 USA
关键词
MOLECULAR-DYNAMICS SIMULATIONS; WATER INTERACTION POTENTIALS; MANY-BODY POLARIZATION; ALKALI-METAL IONS; GIBBS FREE-ENERGY; AB-INITIO; DIELECTRIC-PROPERTIES; HYDRATION ENERGIES; SOLVATION; HALIDE;
D O I
10.1021/ct900576a
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
An accurate representation of ion solvation in aqueous solution is critical for meaningful computer simulations of a broad range of physical and biological processes. Polarizable models based on classical Drude oscillators are introduced and parametrized for a large set of monatomic ions including cations of the alkali metals (Li+, Na+, K+, Rb+, and Cs+) and alkaline earth elements (Mg2+, Ca2+, Sr2+, and Ba2+) along with Zn2+ and halide anions (F-, Cl-, Br-, and I-). The models are parametrized, in conjunction with the polarizable SWM4-NDP water model [Lamoureux et al. Chem. Phys. Lett, 2006, 418, 245], to be consistent with a wide assortment of experimentally measured aqueous bulk thermodynamic properties and the energetics of small ion-water clusters. Structural and dynamic properties of the resulting ion models in aqueous solutions at infinite dilution are presented.
引用
收藏
页码:774 / 786
页数:13
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