Dissipative particle dynamics: dissipative forces from atomistic simulation

被引:6
|
作者
Sokhan, Vlad P. [1 ]
Todorov, Ilian T. [1 ]
机构
[1] STFC Daresbury Lab, Sci Tech Daresbury, Warrington, Cheshire, England
基金
英国工程与自然科学研究理事会;
关键词
Dissipative particle dynamics; molecular dynamics; coarse-graining; parameters estimation; DL_POLY; COARSE-GRAINED MODEL; SYSTEMS; FIELD; POTENTIALS; ALGORITHMS;
D O I
10.1080/08927022.2019.1578353
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We present a novel approach of mapping dissipative particle dynamics (DPD) into classical molecular dynamics. By introducing the invariant volume element representing the swarm of atoms, we show that the interactions between the emerging Brownian quasiparticles arise naturally from its geometric definition and include both conservative repulsion and dissipative drag forces. The quasiparticles, which are composed of atomistic host solvent rather than being simply immersed in it, provide a link between the atomistic and DPD levels and a practical route to extract the DPD parameters as direct statistical averages over the atomistic host system. The method thus provides the molecular foundations for the mesoscopic DPD. It is illustrated on the example of simple monatomic supercritical fluid demonstrating good agreement in thermodynamic and transport properties calculated for the atomistic system and DPD using the obtained parameters.
引用
收藏
页码:248 / 256
页数:9
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