Complete mitochondrial genome of the Turbinaria bifrons (Scleractinia, Dendrophylliidae)

被引：0

作者：

Tian, Peng ^{[1
]}

Xiao, Jiaguang ^{[1
]}

Jia, Zhiyu ^{[1
]}

Wang, Xiaolei ^{[1
]}

Wang, Wei ^{[1
]}

Huang, Dingyong ^{[1
]}

Wang, Jianjia ^{[1
]}

Niu, Wentao ^{[1
]}

机构：

[1] Minist Nat Resources, Lab Marine Biol & Ecol, Inst Oceanog 3, Xiamen, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2021年 / 6卷 / 08期

基金：

中国国家自然科学基金;

关键词：

Mitogenome; next-generation sequence; phylogeny; Scleractinia;

D O I：

10.1080/23802359.2021.1948368

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

In this study, the complete mitogenome sequence of the stony coral, Turbinaria bifrons Bruggemann, 1877, has been decoded for the first time by next-generation sequencing (NGS) and genome assembly. The assembled mitogenome was 18,880 bp in length, contained 13 protein coding genes, 2 transfer RNAs, and 2 ribosomal RNAs. The complete mitogenome of T. bifrons showing 97.09% identities to Tubastraea tagusensis. The complete mitogenome provides essential and important DNA molecular data for further phylogenetic and evolutionary analysis for coral phylogeny.

引用

页码：2237 / 2239

页数：3

共 12 条

[1] Cyphastrea (Cnidaria : Scleractinia : Merulinidae) in the Red Sea: phylogeny and a new reef coral species [J].

Arrigoni, Roberto ;

Berumen, Michael L. ;

Huang, Danwei ;

Terraneo, Tullia I. ;

Benzoni, Francesca .

INVERTEBRATE SYSTEMATICS, 2017, 31 (02) :141-+

[2] MITOS: Improved de novo metazoan mitochondrial genome annotation [J].

Bernt, Matthias ;

Donath, Alexander ;

Juehling, Frank ;

Externbrink, Fabian ;

Florentz, Catherine ;

Fritzsch, Guido ;

Puetz, Joern ;

Middendorf, Martin ;

Stadler, Peter F. .

MOLECULAR PHYLOGENETICS AND EVOLUTION, 2013, 69 (02) :313-319

[3] NOVOPlasty: de novo assembly of organelle genomes from whole genome data [J].

Dierckxsens, Nicolas ;

Mardulyn, Patrick ;

Smits, Guillaume .

NUCLEIC ACIDS RESEARCH, 2017, 45 (04)

[4]

Fukami H, 2000, ZOOL SCI, V17, P689, DOI 10.2108/zsj.15.689

[5]

Hoeksema B.W., 2020, World List Scleractinia

[6] An integrated pipeline for next-generation sequencing and annotation of mitochondrial genomes [J].

Jex, Aaron R. ;

Hall, Ross S. ;

Littlewood, D. Timothy J. ;

Gasser, Robin B. .

NUCLEIC ACIDS RESEARCH, 2010, 38 (02) :522-533

[7]

Kumar S, 2016, MOL BIOL EVOL, V33, P1870, DOI [10.1093/molbev/msw054, 10.1093/molbev/msv279]

[8] The complete mitogenome of Callista chinensis (Bivalvia: Veneridae) [J].

Li, Biquan ;

Luo, Site .

MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (03) :1028-1031

[9] Complete mitochondrial genome of Echinophyllia aspera (Scleractinia, Lobophylliidae): Mitogenome characterization and phylogenetic positioning [J].

Niu, Wentao ;

Yu, Shuangen ;

Tian, Peng ;

Xiao, Jiaguang .

ZOOKEYS, 2018, (793) :1-14

[10] Next-generation sequencing transforms today's biology [J].

Schuster, Stephan C. .

NATURE METHODS, 2008, 5 (01) :16-18

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