The personal and clinical utility of polygenic risk scores

被引:1001
作者
Torkamani, Ali [1 ,2 ]
Wineinger, Nathan E. [1 ,2 ]
Topol, Eric J. [1 ,3 ]
机构
[1] Scripps Res Inst, Scripps Translat Sci Inst, La Jolla, CA 92037 USA
[2] Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA 92037 USA
[3] Scripps Res Inst, Dept Mol Med, La Jolla, CA 92037 USA
基金
美国国家卫生研究院;
关键词
CORONARY-HEART-DISEASE; GENOME-WIDE ASSOCIATION; BREAST-CANCER RISK; FORCE RECOMMENDATION STATEMENT; SNP-BASED HERITABILITY; PROSTATE-CANCER; GENETIC RISK; COMPLEX TRAITS; CARDIOVASCULAR-DISEASE; MISSING HERITABILITY;
D O I
10.1038/s41576-018-0018-x
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Initial expectations for genome-wide association studies were high, as such studies promised to rapidly transform personalized medicine with individualized disease risk predictions, prevention strategies and treatments. Early findings, however, revealed a more complex genetic architecture than was anticipated for most common diseases - complexity that seemed to limit the immediate utility of these findings. As a result, the practice of utilizing the DNA of an individual to predict disease has been judged to provide little to no useful information. Nevertheless, recent efforts have begun to demonstrate the utility of polygenic risk profiling to identify groups of individuals who could benefit from the knowledge of their probabilistic susceptibility to disease. In this context, we review the evidence supporting the personal and clinical utility of polygenic risk profiling.
引用
收藏
页码:581 / 590
页数:10
相关论文
共 99 条
[1]   Genomic prediction of coronary heart disease [J].
Abraham, Gad ;
Havulinna, Aki S. ;
Bhalala, Oneil G. ;
Byars, Sean G. ;
De Livera, Alysha M. ;
Yetukuri, Laxman ;
Tikkanen, Emmi ;
Perola, Markus ;
Schunkert, Heribert ;
Sijbrands, Eric J. ;
Palotie, Aarno ;
Samani, Nilesh J. ;
Salomaa, Veikko ;
Ripatti, Samuli ;
Inouye, Michael .
EUROPEAN HEART JOURNAL, 2016, 37 (43) :3267-3278
[2]   A meta-analysis of 87,040 individuals identifies 23 new susceptibility loci for prostate cancer [J].
Al Olama, Ali Amin ;
Kote-Jarai, Zsofia ;
Berndt, Sonja I. ;
Conti, David V. ;
Schumacher, Fredrick ;
Han, Ying ;
Benlloch, Sara ;
Hazelett, Dennis J. ;
Wang, Zhaoming ;
Saunders, Ed ;
Leongamornlert, Daniel ;
Lindstrom, Sara ;
Jugurnauth-Little, Sara ;
Dadaev, Tokhir ;
Tymrakiewicz, Malgorzata ;
Stram, Daniel O. ;
Rand, Kristin ;
Wan, Peggy ;
Stram, Alex ;
Sheng, Xin ;
Pooler, Loreall C. ;
Park, Karen ;
Xia, Lucy ;
Tyrer, Jonathan ;
Kolonel, Laurence N. ;
Le Marchand, Loic ;
Hoover, Robert N. ;
Machiela, Mitchell J. ;
Yeager, Merideth ;
Burdette, Laurie ;
Chung, Charles C. ;
Hutchinson, Amy ;
Yu, Kai ;
Goh, Chee ;
Ahmed, Mahbubl ;
Govindasami, Koveela ;
Guy, Michelle ;
Tammela, Teuvo L. J. ;
Auvinen, Anssi ;
Wahlfors, Tlina ;
Schleutker, Johanna ;
Visakorpi, Tapio ;
Leinonen, Katri A. ;
Xu, Jianfeng ;
Aly, Markus ;
Donovan, Jenny ;
Travis, Ruth C. ;
Key, Tim J. ;
Siddiq, Afshan ;
Canzian, Federico .
NATURE GENETICS, 2014, 46 (10) :1103-1109
[3]   The OncoArray Consortium: A Network for Understanding the Genetic Architecture of Common Cancers [J].
Amos, Christopher I. ;
Dennis, Joe ;
Wang, Zhaoming ;
Byun, Jinyoung ;
Schumacher, Fredrick R. ;
Gayther, Simon A. ;
Casey, Graham ;
Hunter, David J. ;
Sellers, Thomas A. ;
Gruber, Stephen B. ;
Dunning, Alison M. ;
Michailidou, Kyriaki ;
Fachal, Laura ;
Doheny, Kimberly ;
Spurdle, Amanda B. ;
Li, Yafang ;
Xiao, Xiangjun ;
Romm, Jane ;
Pugh, Elizabeth ;
Coetzee, Gerhard A. ;
Hazelett, Dennis J. ;
Bojesen, Stig E. ;
Caga-Anan, Charlisse ;
Haiman, Christopher A. ;
Kamal, Ahsan ;
Luccarini, Craig ;
Tessier, Daniel ;
Vincent, Daniel ;
Bacot, Francois ;
Van den Berg, David J. ;
Nelson, Stefanie ;
Demetriades, Stephen ;
Goldgar, David E. ;
Couch, Fergus J. ;
Forman, Judith L. ;
Giles, Graham G. ;
Conti, David V. ;
Bickeboeller, Heike ;
Risch, Angela ;
Waldenberger, Melanie ;
Brueske-Hohlfeld, Irene ;
Hicks, Belynda D. ;
Ling, Hua ;
McGuffog, Lesley ;
Lee, Andrew ;
Kuchenbaecker, Karoline ;
Soucy, Penny ;
Manz, Judith ;
Cunningham, Julie M. ;
Butterbach, Katja .
CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION, 2017, 26 (01) :126-135
[4]  
[Anonymous], 2018, MIT TECHNOL REV
[5]   Average risks of breast and ovarian cancer associated with BRCA1 or BRCA2 mutations detected in case series unselected for family history:: A combined analysis of 22 studies [J].
Antoniou, A ;
Pharoah, PDP ;
Narod, S ;
Risch, HA ;
Eyfjord, JE ;
Hopper, JL ;
Loman, N ;
Olsson, H ;
Johannsson, O ;
Borg, Å ;
Pasini, B ;
Radice, P ;
Manoukian, S ;
Eccles, DM ;
Tang, N ;
Olah, E ;
Anton-Culver, H ;
Warner, E ;
Lubinski, J ;
Gronwald, J ;
Gorski, B ;
Tulinius, H ;
Thorlacius, S ;
Eerola, H ;
Nevanlinna, H ;
Syrjäkoski, K ;
Kallioniemi, OP ;
Thompson, D ;
Evans, C ;
Peto, J ;
Lalloo, F ;
Evans, DG ;
Easton, DF .
AMERICAN JOURNAL OF HUMAN GENETICS, 2003, 72 (05) :1117-1130
[6]   Beyond Mendel: An evolving view of human genetic disease transmission [J].
Badano, JL ;
Katsanis, N .
NATURE REVIEWS GENETICS, 2002, 3 (10) :779-789
[7]   The infinitesimal model: Definition, derivation, and implications [J].
Barton, N. H. ;
Etheridge, A. M. ;
Veber, A. .
THEORETICAL POPULATION BIOLOGY, 2017, 118 :50-73
[8]  
Bhatia G, 2016, SUBTLE STRATIFICATIO
[9]   The US Preventive Services Task Force 2017 Draft Recommendation Statement on Screening for Prostate Cancer An Invitation to Review and Comment [J].
Bibbins-Domingo, Kirsten ;
Grossman, David C. ;
Curry, Susan J. .
JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION, 2017, 317 (19) :1949-1950
[10]   Statin Use for the Primary Prevention of Cardiovascular Disease in Adults US Preventive Services Task Force Recommendation Statement [J].
Bibbins-Domingo, Kirsten ;
Grossman, David C. ;
Curry, Susan J. ;
Davidson, KarinaW. ;
Epling, John W., Jr. ;
Garcia, Francisco A. R. ;
Gillman, Matthew W. ;
Kemper, Alex R. ;
Krist, Alex H. ;
Kurth, Ann E. ;
Landefeld, C. Seth ;
LeFevre, Michael L. ;
Mangione, Carol M. ;
Phillips, William R. ;
Owens, Douglas K. ;
Phipps, Maureen G. ;
Pignone, Michael P. .
JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION, 2016, 316 (19) :1997-2007