MS-based lipidomics of human blood plasma: a community-initiated position paper to develop accepted guidelines

被引:229
作者
Burla, Bo [1 ]
Arita, Makoto [3 ,4 ,5 ]
Arita, Masanori [6 ]
Bendt, Anne K. [1 ]
Cazenave-Gassiot, Amaury [2 ]
Dennis, Edward A. [7 ,8 ]
Ekroos, Kim [9 ]
Han, Xianlin [10 ,11 ]
Ikeda, Kazutaka [3 ,4 ]
Liebisch, Gerhard [12 ]
Lin, Michelle K. [2 ]
Loh, Tze Ping [13 ]
Meikle, Peter J. [14 ]
Oresic, Matej [15 ]
Quehenberger, Oswald [16 ,17 ]
Shevchenko, Andrej [18 ]
Torta, Federico [2 ]
Wakelam, Michael J. O. [19 ]
Wheelock, Craig E. [20 ]
Wenk, Markus R. [1 ,2 ]
机构
[1] Natl Univ Singapore, Inst Life Sci, Singapore Lipid Incubator SLING, Singapore, Singapore
[2] Natl Univ Singapore, YLL Sch Med, Dept Biochem, Singapore, Singapore
[3] RIKEN Ctr Integrat Med Sci, Lab Metabol, Yokohama, Kanagawa, Japan
[4] Yokohama City Univ, Grad Sch Med Life Sci, Cellular & Mol Epigenet Lab, Yokohama, Kanagawa, Japan
[5] Keio Univ, Fac Pharm, Div Physiol Chem & Metab, Tokyo, Japan
[6] Natl Inst Genet, Shizuoka, Japan
[7] Univ Calif San Diego, Sch Med, Dept Pharmacol, La Jolla, CA 92093 USA
[8] Univ Calif San Diego, Sch Med, Dept Chem & Biochem, La Jolla, CA 92093 USA
[9] Lipid Consulting Ltd, Espoo, Finland
[10] Univ Texas Hlth Sci Ctr San Antonio, Barshop Inst Longev & Aging Studies, San Antonio, TX 78229 USA
[11] Univ Texas Hlth Sci Ctr San Antonio, Dept Med Diabet, San Antonio, TX 78229 USA
[12] Univ Regensburg, Inst Clin Chem & Lab Med, Regensburg, Germany
[13] Natl Univ Singapore Hosp, Dept Lab Med, Singapore, Singapore
[14] Baker Heart & Diabet Inst, Melbourne, Vic, Australia
[15] Univ Turku, Turku Ctr Biotechnol, Turku, Finland
[16] Univ Calif San Diego, Sch Med, Dept Pharmacol, La Jolla, CA 92093 USA
[17] Univ Calif San Diego, Sch Med, Dept Med, La Jolla, CA 92093 USA
[18] Max Planck Inst Mol Cell Biol & Genet, Dresden, Germany
[19] Babraham Inst, Cambridge, England
[20] Karolinska Inst, Dept Med Biochem & Biophys, Div Physiol Chem 2, Stockholm, Sweden
基金
英国医学研究理事会; 瑞典研究理事会; 芬兰科学院; 新加坡国家研究基金会; 英国生物技术与生命科学研究理事会; 美国国家卫生研究院; 日本学术振兴会;
关键词
clinical trials; diagnostic tools; lipids; mass spectrometry; absolute concentrations; clinical research; data sharing; National Institute of Standards and Technology Standard Reference Material 1950; quality control; STANDARD REFERENCE MATERIAL; LC-MS/MS METHOD; MASS-SPECTROMETRY; HIGH-THROUGHPUT; SHOTGUN LIPIDOMICS; QUANTITATIVE-ANALYSIS; GAS-CHROMATOGRAPHY; QUALITY ASSESSMENT; SERUM; METABOLITES;
D O I
10.1194/jlr.S087163
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Human blood is a self-regenerating lipid-rich biological fluid that is routinely collected in hospital settings. The inventory of lipid molecules found in blood plasma (plasma lipidome) offers insights into individual metabolism and physiology in health and disease. Disturbances in the plasma lipidome also occur in conditions that are not directly linked to lipid metabolism; therefore, plasma lipidomics based on MS is an emerging tool in an array of clinical diagnostics and disease management. However, challenges exist in the translation of such lipidomic data to clinical applications. These relate to the reproducibility, accuracy, and precision of lipid quantitation, study design, sample handling, and data sharing. This position paper emerged from a workshop that initiated a community-led process to elaborate and define a set of generally accepted guidelines for quantitative MS-based lipidomics of blood plasma or serum, with harmonization of data acquired on different instrumentation platforms across independent laboratories as an ultimate goal. We hope that other fields may benefit from and follow such a precedent.
引用
收藏
页码:2001 / 2017
页数:17
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