Identification and Validation of a Novel Immune-Related lncRNA Signature for Bladder Cancer

被引:4
作者
Hua, Shan [1 ]
Xie, Zhiwen [1 ]
Wang, Wenhao [1 ]
Wan, Zhong [2 ]
Chen, Min [1 ]
Zhao, Sheng [1 ]
Jiang, Juntao [1 ]
机构
[1] Shanghai Jiao Tong Univ, Sch Med, Shanghai Gen Hosp, Dept Urol, Shanghai, Peoples R China
[2] Shanghai Univ Tradit Chinese Med, Shuguang Hosp, Dept Urol, Shanghai, Peoples R China
来源
FRONTIERS IN ONCOLOGY | 2021年 / 11卷
基金
中国国家自然科学基金;
关键词
urinary bladder neoplasms; long noncoding ribonucleic acids; signature; tumor-infiltrating immune cell; checkpoint blockade therapy; MICROENVIRONMENT; CELLS;
D O I
10.3389/fonc.2021.704946
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Purpose We aimed to construct an immune-related long noncoding ribonucleic acids (irlncRNA) signature to evaluate the prognosis of patients without specific expression level of these irlncRNA. Methods The raw transcriptome data were downloaded from The Cancer Genome Atlas (TCGA), irlncRNAs were filtered out using an online immune related gene database and coexpression analysis, differently expressed irlncRNA (DEirlncRNA) pairs were identified by univariate analysis. The areas under curve (AUC) were compared and the Akaike information criterion (AIC) values of receiver operating curve (ROC) was counted, the most optimal model was constructed to divide bladder cancer patients into high- and low-risk groups usingo the cut-off point of ROC. Then, we evaluated them from multiple perspectives, such as survival time, clinic-pathological characteristics, immune-related cells infiltrating, chemotherapeutics efficacy and immune checkpoint inhibitors. Results 14 DEirlncRNA pairs were included in this signature. Patients in high-risk groups demonstrated apparent shorter survival time, more aggressive clinic-pathological characteristics, different immune-related cells infiltrating status, lower chemotherapeutics efficacy. Conclusion The irlncRNA signature demonstrated a promising prediction value for bladder cancer patients and was important in guiding clinical treatment.
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页数:9
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共 35 条
  • [1] Cancer stem cells as a therapeutic target in bladder cancer
    Aghaalikhani, Nazi
    Rashtchizadeh, Nadereh
    Shadpour, Pejman
    Allameh, Abdolamir
    Mahmoodi, Marzieh
    [J]. JOURNAL OF CELLULAR PHYSIOLOGY, 2019, 234 (04) : 3197 - 3206
  • [2] Docetaxel for the treatment of bladder cancer
    Albany, Costantine
    Sonpavde, Guru
    [J]. EXPERT OPINION ON INVESTIGATIONAL DRUGS, 2015, 24 (12) : 1657 - 1664
  • [3] Bladder Cancer Incidence and Mortality: A Global Overview and Recent Trends
    Antoni, Sebastien
    Ferlay, Jacques
    Soerjomataram, Isabelle
    Znaor, Ariana
    Jemal, Ahmedin
    Bray, Freddie
    [J]. EUROPEAN UROLOGY, 2017, 71 (01) : 96 - 108
  • [4] Aran D, 2020, METHODS MOL BIOL, V2120, P263, DOI 10.1007/978-1-0716-0327-7_19
  • [5] xCell: digitally portraying the tissue cellular heterogeneity landscape
    Aran, Dvir
    Hu, Zicheng
    Butte, Atul J.
    [J]. GENOME BIOLOGY, 2017, 18
  • [6] Immunobiology of Long Noncoding RNAs
    Atianand, Maninjay K.
    Caffrey, Daniel R.
    Fitzgerald, Katherine A.
    [J]. ANNUAL REVIEW OF IMMUNOLOGY, VOL 35, 2017, 35 : 177 - 198
  • [7] Current Panorama and Challenges for Neoadjuvant Cancer Immunotherapy
    Benitez, Jose Carlos
    Remon, Jordi
    Besse, Benjamin
    [J]. CLINICAL CANCER RESEARCH, 2020, 26 (19) : 5068 - 5077
  • [8] LncRNA HOTAIR: A master regulator of chromatin dynamics and cancer
    Bhan, Arunoday
    Mandal, Subhrangsu S.
    [J]. BIOCHIMICA ET BIOPHYSICA ACTA-REVIEWS ON CANCER, 2015, 1856 (01): : 151 - 164
  • [9] Chen BB, 2018, METHODS MOL BIOL, V1711, P243, DOI 10.1007/978-1-4939-7493-1_12
  • [10] Gene regulation in the immune system by long noncoding RNAs
    Chen, Y. Grace
    Satpathy, Ansuman T.
    Chang, Howard Y.
    [J]. NATURE IMMUNOLOGY, 2017, 18 (09) : 962 - 972