An assessment of integrated population models: bias, accuracy, and violation of the assumption of independence

被引:170
作者
Abadi, Fitsum [1 ]
Gimenez, Olivier [2 ]
Arlettaz, Raphael [1 ,3 ]
Schaub, Michael [1 ,3 ]
机构
[1] Univ Bern, Div Conservat Biol, Inst Ecol & Evolut, CH-3012 Bern, Switzerland
[2] Ctr Ecol Fonct & Evolut, UMR 5175, F-34293 Montpellier 5, France
[3] Swiss Ornithol Inst, CH-6024 Sempach, Switzerland
基金
瑞士国家科学基金会;
关键词
accuracy; Bayesian; capture-recapture; dependent data; independent data; individual-based model; Leslie matrix model; population survey data; reproductive success; state-space model; MARK-RECAPTURE-RECOVERY; ANIMAL ABUNDANCE; DYNAMICS; FRAMEWORK; WINBUGS;
D O I
10.1890/08-2235.1
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
Understanding population dynamics requires accurate estimates of demographic rates. Integrated population models combine demographic and survey data into a single, comprehensive analysis and provide more coherent estimates of vital rates. Integrated Population models rely on the assumption that different data sets are independent, which is frequently violated in practice. Moreover, the precision that call be gained using integrated modeling compared to conventional modeling is only known from empirical studies. The present study used simulation Methods to assess how the violation of the assumption of independence affects the statistical properties of the parameter estimators. Further, the gains in precision and accuracy from the model were explored under varying sample sizes. For capture-recapture, population survey, and reproductive success, we generated independent and dependent data that were analyzed with integrated and conventional models. We found only a minimal impact of the violation of the assumption of independence on the parameter estimates. Furthermore, we observed an overall gain in precision and accuracy when all three data sets were analyzed simultaneously. This was particularly pronounced when the sample size was small. These findings contribute to clearing the way for the application of integrated population models in practice.
引用
收藏
页码:7 / 14
页数:8
相关论文
共 26 条
[1]  
[Anonymous], 2005, R LANG ENV STAT COMP
[2]   The potential of integrated population modelling [J].
Besbeas, P ;
Freeman, SN ;
Morgan, BJT .
AUSTRALIAN & NEW ZEALAND JOURNAL OF STATISTICS, 2005, 47 (01) :35-48
[3]   Integrating mark-recapture-recovery and census data to estimate animal abundance and demographic parameters [J].
Besbeas, P ;
Freeman, SN ;
Morgan, BJT ;
Catchpole, EA .
BIOMETRICS, 2002, 58 (03) :540-547
[4]   The efficient integration of abundance and demographic data [J].
Besbeas, P ;
Lebreton, JD ;
Morgan, BJT .
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES C-APPLIED STATISTICS, 2003, 52 :95-102
[5]  
Besbeas P, 2009, ENVIRON ECOL STAT SE, V3, P513, DOI 10.1007/978-0-387-78151-8_22
[6]  
Borysiewicz RS, 2009, ENVIRON ECOL STAT SE, V3, P579, DOI 10.1007/978-0-387-78151-8_25
[7]  
Brooks S. P., 2004, Animal Biodiversity and Conservation, V27, P515
[8]   General methods for monitoring convergence of iterative simulations [J].
Brooks, SP ;
Gelman, A .
JOURNAL OF COMPUTATIONAL AND GRAPHICAL STATISTICS, 1998, 7 (04) :434-455
[9]   State-space models for the dynamics of wild animal populations [J].
Buckland, ST ;
Newman, KB ;
Thomas, L ;
Koesters, NB .
ECOLOGICAL MODELLING, 2004, 171 (1-2) :157-175
[10]   Embedding population dynamics models in inference [J].
Buckland, Stephen T. ;
Newman, Ken B. ;
Fernandez, Carmen ;
Thomas, Len ;
Harwood, John .
STATISTICAL SCIENCE, 2007, 22 (01) :44-58