TRANSFER LEARNING USING INCEPTION-RESNET-V2 MODEL TO THE AUGMENTED NEUROIMAGES DATA FOR AUTISM SPECTRUM DISORDER CLASSIFICATION

被引:27
作者
Dominic, Nicholas [1 ]
Daniel [1 ]
Cenggoro, Tjeng Wawan [2 ,3 ]
Budiarto, Arif [2 ,3 ]
Pardamean, Bens [1 ,3 ]
机构
[1] Bina Nusantara Univ, Comp Sci Dept, BINUS Grad Program, Master Comp Sci Program, Jakarta 11480, Indonesia
[2] Bina Nusantara Univ, Sch Comp Sci, Comp Sci Dept, Jakarta 11480, Indonesia
[3] Bina Nusantara Univ, Bioinformat & Data Sci Res Ctr, Jakarta 11480, Indonesia
关键词
psychiatric; rs-fMRI; autism spectrum disorder; transfer learning; classification; InceptionResNetV2; DISABILITIES MONITORING NETWORK; DEEP NEURAL-NETWORK; UNITED-STATES; IDENTIFICATION; SITES;
D O I
10.28919/cmbn/5565
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
From a psychiatric perspective, the detection of Autism Spectrum Disorders (ASD) can be seen from the differences in some parts of the brain. The availability of the four-dimensional resting-state Functional Magnetic Resonance Imaging (rs-fMRI) from Autism Brain Imaging Data Exchange I (ABIDE I) led us to reorganize it into two-dimensional data and extracted it further to create a pool of neuroimage dataset. This dataset was then augmented by shear transformation, brightness, and zoom adjustments. Resampling and normalization were also performed. Reflecting on prior studies, this classification accuracy of ASD using only 2D neuroimages should be improved. Hence, we proposed the use of transfer learning with the InceptionResNetV2 model on the augmented dataset. After freezing layer by layer, the best training, validation, and testing results were 70.22%, 57.75%, and 57.6%, respectively. We proved that the transfer learning approach was successfully outperformed the convolutional neural network (CNN) model from the previous study by up to 2.6%.
引用
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页数:21
相关论文
共 38 条
[1]  
American Psychiatric Association, 2013, DIAGN STAT MAN MENT, DOI [10.1176/appi.books.9780890420249.dsm-iv-tr, DOI 10.1176/APPI.BOOKS.9780890425596]
[2]  
[Anonymous], 2016, ARXIV160207261CS
[3]   Large-scale analyses of the relationship between sex, age and intelligence quotient heterogeneity and cortical morphometry in autism spectrum disorder [J].
Bedford, Saashi A. ;
Park, Min Tae M. ;
Devenyi, Gabriel A. ;
Tullo, Stephanie ;
Germann, Jurgen ;
Patel, Raihaan ;
Anagnostou, Evdokia ;
Baron-Cohen, Simon ;
Bullmore, Edward T. ;
Chura, Lindsay R. ;
Craig, Michael C. ;
Ecker, Christine ;
Floris, Dorothea L. ;
Holt, Rosemary J. ;
Lenroot, Rhoshel ;
Lerch, Jason P. ;
Lombardo, Michael, V ;
Murphy, Declan G. M. ;
Raznahan, Armin ;
Ruigrok, Amber N., V ;
Smith, Elizabeth ;
Spencer, Michael D. ;
Suckling, John ;
Taylor, Margot J. ;
Thurm, Audrey ;
Lai, Meng-Chuan ;
Chakravarty, M. Mallar .
MOLECULAR PSYCHIATRY, 2020, 25 (03) :614-628
[4]   FEATURE IMPORTANCE OF THE AORTIC ANATOMY ON ENDOVASCULAR ANEURYSM REPAIR (EVAR) USING BORUTA AND BAYESIAN MCMC [J].
Caraka, Rezzy Eko ;
Nugroho, Nyityasmono Tri ;
Tai, Shao-Kuo ;
Chen, Rung-Ching ;
Toharudin, Toni ;
Pardamean, Bens .
COMMUNICATIONS IN MATHEMATICAL BIOLOGY AND NEUROSCIENCE, 2020,
[5]  
Cenggoro Tjeng Wawan, 2018, IOP Conference Series: Earth and Environmental Science, V195, DOI 10.1088/1755-1315/195/1/012063
[6]   Features Importance in Classification Models for Colorectal Cancer Cases Phenotype in Indonesia [J].
Cenggoro, Tjeng Wawan ;
Mahesworo, Bharuno ;
Budiarto, Arif ;
Baurley, James ;
Suparyanto, Teddy ;
Pardamean, Bens .
4TH INTERNATIONAL CONFERENCE ON COMPUTER SCIENCE AND COMPUTATIONAL INTELLIGENCE (ICCSCI 2019) : ENABLING COLLABORATION TO ESCALATE IMPACT OF RESEARCH RESULTS FOR SOCIETY, 2019, 157 :313-320
[7]  
Cenggoro TW, 2018, 2018 INDONESIAN ASSOCIATION FOR PATTERN RECOGNITION INTERNATIONAL CONFERENCE (INAPR), P329, DOI 10.1109/INAPR.2018.8627019
[8]   Autism spectrum disorder at the crossroad between genes and environment: contributions, convergences, and interactions in ASD developmental pathophysiology [J].
Cheroni, Cristina ;
Caporale, Nicolo ;
Testa, Giuseppe .
MOLECULAR AUTISM, 2020, 11 (01)
[9]   ASD-DiagNet: A Hybrid Learning Approach for Detection of Autism Spectrum Disorder Using fMRI Data [J].
Eslami, Taban ;
Mirjalili, Vahid ;
Fong, Alvis ;
Laird, Angela R. ;
Saeed, Fahad .
FRONTIERS IN NEUROINFORMATICS, 2019, 13
[10]  
Farida, 2018, 2018 INDONESIAN ASSOCIATION FOR PATTERN RECOGNITION INTERNATIONAL CONFERENCE (INAPR), P71, DOI 10.1109/INAPR.2018.8627000