Efficient protein digestion using immobilized trypsin onto tannin modified Fe3O4 magnetic nanoparticles

被引:47
作者
Atacan, Keziban [1 ]
Cakiroglu, Bekir [1 ]
Ozacar, Mahmut [1 ,2 ]
机构
[1] Sakarya Univ, Biomed Magnet & Semicond Mat Res Ctr BIMAS RC, TR-54187 Sakarya, Turkey
[2] Sakarya Univ, Dept Chem, Sci & Arts Fac, TR-54187 Sakarya, Turkey
关键词
Fe3O4; Covalent bonding; Trypsin immobilization; Protein digestion; Sequence coverage; COLLOIDAL NANOCRYSTAL CLUSTERS; PROTEOLYSIS; CHEMISTRY; FERRITE; FACILE;
D O I
10.1016/j.colsurfb.2017.04.055
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Fe3O4 magnetic nanoparticles (MNPs) were prepared via solvothermal method. A commercially available trypsin was covalently immobilized onto MNPs modified with tannin (T) via a novel binding process. The morphology, structure, surface and magnetic properties of the obtained nanostructures were characterized comprehensively. The Fe3O4 MNPs had a saturation magnetization value of 60.18 emu/g at room temperature, while the tannin modified Fe3O4 MNPs, and the trypsin immobilized on tannin modified-Fe3O4 MNPs possessed a saturation magnetization value of 57.82 emu/g and 55.16 emu/g, respectively, which indicated the decent tannin coating and trypsin immobilization. The general applicability of the immobilized trypsin for proteomic studies was confirmed by enzymatic digestion of widely used bovine serum albumin (BSA). The immobilized trypsin was investigated by conducting the tryptic digestion of BSA within 1 min, 5 min and 15 min. Also, microwave-assisted digestion was carried out for 15 s. The digested protein fragments were identified by matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS), and a satisfactory peptide numbers of 39, and a superior sequence coverage of 84% for 1 min digestion were obtained. The sodium dodecyl sulphate-polyacrylamide gel electrophoresis (SDS-PAGE) analysis confirmed the satisfactory digestion of BSA and egg white proteins by immobilized trypsin. (C) 2017 Elsevier B.V. All rights reserved.
引用
收藏
页码:9 / 18
页数:10
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