Hydrogenivirga caldilitoris gen. nov., sp nov., a novel extremely thermophilic, hydrogen- and sulfur-oxidizing bacterium from a coastal hydrothermal field

被引:32
作者
Nakagawa, S [1 ]
Nakamura, S
Inagaki, F
Takai, K
Shirai, N
Sako, Y
机构
[1] Kyoto Univ, Grad Sch Agr, Lab Marine Microbiol, Kyoto 6068502, Japan
[2] Japan Agcy Marine Earth Sci & Technol, SUGAR, Frontier Res Syss Extremophiles, Yokosuka, Kanagawa 2370061, Japan
[3] Ind Res Ctr Shiga Prefecture, Ritto, Shiga 5203004, Japan
关键词
D O I
10.1099/ijs.0.03031-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel extremely thermophilic, hydrogen- and sulfur-oxidizing bacterium, designated strain IBSK3(T), was isolated from a coastal hot spring in lbusuki, Kagoshima Prefecture, Japan. The cells were motile, straight to slightly curved rods (1(.)2-3(.)0 mum long and 0-3-0-4 mum wide), Strain IBSK3T was an obligate chemolithoautotroph growing by respiratory nitrate reduction with H-2, forming N2O as an end product. Low concentrations of O-2 (0-4-7-7 %, v/v; optimum 2-0 %, v/v) could serve as an alternative electron acceptor to growth. In addition, strain IBSK3T was able to utilize elemental sulfur as a sole electron donor with either nitrate or low concentrations Of 02 as an electron acceptor. Growth was observed between 55 and 77-5 degreesC (optimum 75 degreesC; 2 h doubling time), pH 5-5 and 8-3 (optimum pH 6-5-7-0)(1) and in the presence of 0(.)5 and 4(.)0% NaCl (optimum 2-0 %). The G +C content of the genomic DNA was 49(.)2 mol%. On the basis of 16S rRNA gene sequence analysis, strain IBSK3T belonged to the family Aquificaceae, but it only demonstrated a distant phylogenetic relationship with any recognized species within the family (sequence similarity was less than 92 %). On the basis of the physiological and molecular characteristics of the novel isolate, a new genus and novel species are proposed: the type strain of Hydrogenivirga caldilitoris gen. nov., sp. nov. is IBSK3(T) (=jCM 12173(T) =ATCC BAA-821(T)).
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页码:2079 / 2084
页数:6
相关论文
共 35 条
[1]  
ALLEN SE, 1974, CHEM ANAL ECOLOGICAL, P184
[2]   METHANOGENS - RE-EVALUATION OF A UNIQUE BIOLOGICAL GROUP [J].
BALCH, WE ;
FOX, GE ;
MAGRUM, LJ ;
WOESE, CR ;
WOLFE, RS .
MICROBIOLOGICAL REVIEWS, 1979, 43 (02) :260-296
[3]  
Baross John A., 1995, P15
[4]   The complete genome of the hyperthermophilic bacterium Aquifex aeolicus [J].
Deckert, G ;
Warren, PV ;
Gaasterland, T ;
Young, WG ;
Lenox, AL ;
Graham, DE ;
Overbeek, R ;
Snead, MA ;
Keller, M ;
Aujay, M ;
Huber, R ;
Feldman, RA ;
Short, JM ;
Olsen, GJ ;
Swanson, RV .
NATURE, 1998, 392 (6674) :353-358
[5]   ARCHAEA IN COASTAL MARINE ENVIRONMENTS [J].
DELONG, EF .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1992, 89 (12) :5685-5689
[6]   New isolates and physiological properties of the Aquificales and description of Thermocrinis albus sp nov. [J].
Eder, W ;
Huber, R .
EXTREMOPHILES, 2002, 6 (04) :309-318
[7]  
Gillis M., 2001, BERGEYS MANUAL SYSTE, P43, DOI DOI 10.1007/978-0-387-21609-6_7
[8]  
Huber R, 1998, APPL ENVIRON MICROB, V64, P3576
[9]   AQUIFEX-PYROPHILUS GEN-NOV SP-NOV REPRESENTS A NOVEL GROUP OF MARINE HYPERTHERMOPHILIC HYDROGEN-OXIDIZING BACTERIA [J].
HUBER, R ;
WILHARM, T ;
HUBER, D ;
TRINCONE, A ;
BURGGRAF, S ;
KONIG, H ;
RACHEL, R ;
ROCKINGER, I ;
FRICKE, H ;
STETTER, KO .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 1992, 15 (03) :340-351
[10]   Signature lipids and stable carbon isotope analyses of octopus spring hyperthermophilic communities compared with those of Aquificales representatives [J].
Jahnke, LL ;
Eder, W ;
Huber, R ;
Hope, JM ;
Hinrichs, KU ;
Hayes, JM ;
Des Marais, DJ ;
Cady, SL ;
Summons, RE .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2001, 67 (11) :5179-5189