Tracing the evolutionary routes of plant-microbiota interactions

被引:49
作者
Escudero-Martinez, Carmen [1 ]
Bulgarelli, Davide [1 ]
机构
[1] Univ Dundee, Plant Sci, Sch Life Sci, Dundee, Scotland
基金
英国生物技术与生命科学研究理事会;
关键词
BACTERIAL ROOT MICROBIOTA; RHIZOSPHERE MICROBIOME; ARABIDOPSIS-THALIANA; MOLECULAR-GENETICS; COMMUNITY; NITROGEN; AGRICULTURE; SELECTION; WILD;
D O I
10.1016/j.mib.2019.09.013
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The microbiota thriving at the root-soil interface plays a crucial role in supporting plant growth, development and health. The interactions between plant and soil microbes can be traced back to the initial plant's colonisation of dry lands. Understanding the evolutionary drivers of these interactions will be key to re-wire them for the benefit of mankind. Here we critically assess recent insights into the evolutionary history of plant-microbiota interactions in natural and agricultural ecosystems. We identify distinctive features, as well as commonalities, of these two distinct scenarios and areas requiring further research efforts. Finally, we propose strategies that combining advances in molecular microbiology and crop genomics will be key towards a predictable manipulation of plant-microbiota interactions for sustainable crop production.
引用
收藏
页码:34 / 40
页数:7
相关论文
共 50 条
[1]   Functional overlap of the Arabidopsis leaf and root microbiota [J].
Bai, Yang ;
Mueller, Daniel B. ;
Srinivas, Girish ;
Garrido-Oter, Ruben ;
Potthoff, Eva ;
Rott, Matthias ;
Dombrowski, Nina ;
Muench, Philipp C. ;
Spaepen, Stijn ;
Remus-Emsermann, Mitja ;
Huettel, Bruno ;
McHardy, Alice C. ;
Vorholt, Julia A. ;
Schulze-Lefert, Paul .
NATURE, 2015, 528 (7582) :364-+
[2]   Disease-induced assemblage of a plant-beneficial bacterial consortium [J].
Berendsen, Roeland L. ;
Vismans, Gilles ;
Yu, Ke ;
Song, Yang ;
de Jonge, Ronnie ;
Burgman, Wilco P. ;
Burmolle, Mette ;
Herschend, Jakob ;
Bakker, Peter A. H. M. ;
Pieterse, Corne M. J. .
ISME JOURNAL, 2018, 12 (06) :1496-1507
[3]   The rhizosphere microbiome and plant health [J].
Berendsen, Roeland L. ;
Pieterse, Corne M. J. ;
Bakker, Peter A. H. M. .
TRENDS IN PLANT SCIENCE, 2012, 17 (08) :478-486
[4]   A Synthetic Community Approach Reveals Plant Genotypes Affecting the Phyllosphere Microbiota [J].
Bodenhausen, Natacha ;
Bortfeld-Miller, Miriam ;
Ackermann, Martin ;
Vorholt, Julia A. .
PLOS GENETICS, 2014, 10 (04)
[5]   Is diversification history of maize influencing selection of soil bacteria by roots? [J].
Bouffaud, Marie-Lara ;
Kyselkova, Martina ;
Gouesnard, Brigitte ;
Grundmann, Genevieve ;
Muller, Daniel ;
Moenne-Loccoz, Yvan .
MOLECULAR ECOLOGY, 2012, 21 (01) :195-206
[6]   Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley [J].
Bulgarelli, Davide ;
Garrido-Oter, Ruben ;
Muench, Philipp C. ;
Weiman, Aaron ;
Droege, Johannes ;
Pan, Yao ;
McHardy, Alice C. ;
Schulze-Lefert, Paul .
CELL HOST & MICROBE, 2015, 17 (03) :392-403
[7]  
Callahan BJ, 2016, NAT METHODS, V13, P581, DOI [10.1038/NMETH.3869, 10.1038/nmeth.3869]
[8]   QIIME allows analysis of high-throughput community sequencing data [J].
Caporaso, J. Gregory ;
Kuczynski, Justin ;
Stombaugh, Jesse ;
Bittinger, Kyle ;
Bushman, Frederic D. ;
Costello, Elizabeth K. ;
Fierer, Noah ;
Pena, Antonio Gonzalez ;
Goodrich, Julia K. ;
Gordon, Jeffrey I. ;
Huttley, Gavin A. ;
Kelley, Scott T. ;
Knights, Dan ;
Koenig, Jeremy E. ;
Ley, Ruth E. ;
Lozupone, Catherine A. ;
McDonald, Daniel ;
Muegge, Brian D. ;
Pirrung, Meg ;
Reeder, Jens ;
Sevinsky, Joel R. ;
Tumbaugh, Peter J. ;
Walters, William A. ;
Widmann, Jeremy ;
Yatsunenko, Tanya ;
Zaneveld, Jesse ;
Knight, Rob .
NATURE METHODS, 2010, 7 (05) :335-336
[9]   Root microbiota drive direct integration of phosphate stress and immunity [J].
Castrillo, Gabriel ;
Teixeira, Paulo Jose Pereira Lima ;
Paredes, Sur Herrera ;
Law, Theresa F. ;
de Lorenzo, Laura ;
Feltcher, Meghan E. ;
Finkel, Omri M. ;
Breakfield, Natalie W. ;
Mieczkowski, Piotr ;
Jones, Corbin D. ;
Paz-Ares, Javier ;
Dangl, Jeffery L. .
NATURE, 2017, 543 (7646) :513-+
[10]   A Multipurpose Toolkit to Enable Advanced Genome Engineering in Plants [J].
Cermak, Tomas ;
Curtin, Shaun J. ;
Gil-Humanes, Javier ;
Cegan, Radim ;
Kono, Thomas J. Y. ;
Konecna, Eva ;
Belanto, Joseph J. ;
Starker, Colby G. ;
Mathre, Jade W. ;
Greenstein, Rebecca L. ;
Voytas, Daniel F. .
PLANT CELL, 2017, 29 (06) :1196-1217