Chemo-Mechanical Coupling in F1-ATPase Revealed by Catalytic Site Occupancy during Catalysis

被引:38
作者
Shimo-Kon, Rieko [1 ]
Muneyuki, Eiro [2 ]
Sakai, Hiroshi [3 ]
Adachi, Kengo [1 ]
Yoshida, Masasuke [4 ]
Kinosita, Kazuhiko, Jr. [1 ]
机构
[1] Waseda Univ, Dept Phys, Fac Sci & Engn, Shinjuku Ku, Tokyo 169, Japan
[2] Chuo Univ, Dept Phys, Fac Sci & Engn, Bunkyo Ku, Tokyo 112, Japan
[3] Univ Shizuoka, Dept Food & Nutr Sci, Grad Sch Nutr & Environm Sci, Shizuoka 4228526, Japan
[4] Tokyo Inst Technol, Bioresources Div, Chem Resources Lab, Midori Ku, Yokohama, Kanagawa 227, Japan
关键词
BOVINE HEART-MITOCHONDRIA; THERMOPHILIC BACILLUS PS3; YEAST F-1 ATPASE; NUCLEOTIDE-BINDING; MOLECULAR MACHINE; ROTATION; HYDROLYSIS; MECHANISM; SYNTHASE; SUBCOMPLEX;
D O I
10.1016/j.bpj.2009.11.050
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
F-1-ATPase is a rotary molecular motor in which the central gamma subunit rotates inside a cylinder made of alpha(3)beta(3) subunits. To clarify how ATP hydrolysis in three catalytic sites cooperate to drive rotation, we measured the site occupancy, the number of catalytic sites occupied by a nucleotide, while assessing the hydrolysis activity under identical conditions. The results show hitherto unsettled timings of ADP and phosphate releases: starting with ATP binding to a catalytic site at an ATP-waiting gamma angle defined as 0 degrees, phosphate is released at similar to 200 degrees, and ADP is released during quick rotation between 240 degrees and 320 degrees that is initiated by binding of a third ATP. The site occupancy remains two except for a brief moment after the ATP binding, but the third vacant site can bind a medium nucleotide weakly.
引用
收藏
页码:1227 / 1236
页数:10
相关论文
共 41 条
[1]   STRUCTURE AT 2.8-ANGSTROM RESOLUTION OF F1-ATPASE FROM BOVINE HEART-MITOCHONDRIA [J].
ABRAHAMS, JP ;
LESLIE, AGW ;
LUTTER, R ;
WALKER, JE .
NATURE, 1994, 370 (6491) :621-628
[2]   Coupling of rotation and catalysis in F1-ATPase revealed by single-molecule imaging and manipulation [J].
Adachi, Kengo ;
Oiwa, Kazuhiro ;
Nishizaka, Takayuki ;
Furuike, Shou ;
Noji, Hiroyuki ;
Itoh, Hiroyasu ;
Yoshida, Masasuke ;
Kinosita, Kazuhiko, Jr. .
CELL, 2007, 130 (02) :309-321
[3]   F1-ATPase rotates by an asymmetric, sequential mechanism using all three catalytic subunits [J].
Ariga, Takayuki ;
Muneyuki, Eiro ;
Yoshida, Masasuke .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2007, 14 (09) :841-846
[4]   Ground state structure of F1-ATPase from bovine heart mitochondria at 1.9 a resolution [J].
Bowler, Matthew W. ;
Montgomery, Martin G. ;
Leslie, Andrew G. W. ;
Walker, John E. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2007, 282 (19) :14238-14242
[5]  
Boyer P.D., 1981, Energy Coupling in Photosynthesis, P231
[6]   The ATP synthase - A splendid molecular machine [J].
Boyer, PD .
ANNUAL REVIEW OF BIOCHEMISTRY, 1997, 66 :717-749
[7]   Catalytic site occupancy during ATP synthase catalysis [J].
Boyer, PD .
FEBS LETTERS, 2002, 512 (1-3) :29-32
[8]   Studies of nucleotide binding to the catalytic sites of Escherichia coli βY331W-F1-ATPase using fluorescence quenching [J].
Bulygin, Vladimir V. ;
Milgrom, Yakov M. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (11) :4327-4331
[9]   The α3(βY341W)3γ subcomplex of the F1-ATPase from the thermophilic Bacillus PS3 fails to dissociate ADP when MgATP is hydrolyzed at a single catalytic site and attains maximal velocity when three catalytic sites are saturated with MgATP [J].
Dou, C ;
Fortes, PAG ;
Allison, WS .
BIOCHEMISTRY, 1998, 37 (47) :16757-16764
[10]   Temperature dependence of the rotation and hydrolysis activities of F1-ATPase [J].
Furuike, Shou ;
Adachi, Kengo ;
Sakaki, Naoyoshi ;
Shimo-Kon, Rieko ;
Itoh, Hiroyasu ;
Muneyuki, Eiro ;
Yoshida, Masasuke ;
Kinosita, Kazuhiko, Jr. .
BIOPHYSICAL JOURNAL, 2008, 95 (02) :761-770