The significance of genome-wide transcriptional regulation in the evolution of stress tolerance

被引:37
|
作者
Roelofs, Dick [1 ]
Morgan, John
Stuerzenbaum, Stephen [2 ]
机构
[1] Vrije Univ Amsterdam, Inst Ecol Sci, NL-1085 Amsterdam, Netherlands
[2] Kings Coll London, Div Pharmaceut Sci, Sch Biomed & Hlth Sci, London SE1 9NH, England
关键词
TATA box; Cis-regulation; Microarray; Adaptation; METALLOTHIONEIN PROMOTER ALLELES; NEMATODE CAENORHABDITIS-ELEGANS; INSECT ORCHESELLA-CINCTA; HEAVY-METAL TOLERANCE; GENE-EXPRESSION; C-ELEGANS; PHENOTYPIC PLASTICITY; DROSOPHILA-MELANOGASTER; DEVELOPMENTAL VARIANT; NATURAL-POPULATIONS;
D O I
10.1007/s10682-009-9345-x
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
It is widely recognized that stress plays an important role in directing the adaptive adjustment of an organism to changing environments. However, very little is known about the evolution of mechanisms that promote stress-induced variation. Adaptive transcriptional responses have been implicated in the evolution of tolerance to natural and anthropogenic stressors in the environment. Recent technological advances in transcriptomics provide a mechanistic understanding of biological pathways or processes involved in stress-induced phenotypic change. Furthermore, these studies are (semi) quantitative and provide insight into the reaction norms of identified target genes in response to specific stressors. We argue that plasticity in gene expression reaction norms may be important in the evolution of stress tolerance and adaptation to environmental stress. This review highlights the consequences of transcriptional plasticity of stress responses within a single generation and concludes that gene promoters containing a TATA box are more capable of rapid and variable responses than TATA-less genes. In addition, the consequences of plastic transcriptional responses to stress over multiple generations are discussed. Based on examples from the literature, we show that constitutive over expression of specific stress response genes results in stress adapted phenotypes. However, organisms with an innate capacity to buffer stress display plastic transcriptional responses. Finally, we call for an improved integration of the concept of phenotypic plasticity with studies that focus on the regulation of transcription.
引用
收藏
页码:527 / 539
页数:13
相关论文
共 50 条
  • [1] The significance of genome-wide transcriptional regulation in the evolution of stress tolerance
    Dick Roelofs
    John Morgan
    Stephen Stürzenbaum
    Evolutionary Ecology, 2010, 24 : 527 - 539
  • [2] Genome-wide location analysis: insights on transcriptional regulation
    Hawkins, RD
    Ren, B
    HUMAN MOLECULAR GENETICS, 2006, 15 : R1 - R7
  • [3] Genome-wide transcriptional adaptation to salt stress in Populus
    Jin-Gui Liu
    Xiao Han
    Tong Yang
    Wen-Hui Cui
    Ai-Min Wu
    Chun-Xiang Fu
    Bai-Chen Wang
    Li-Jun Liu
    BMC Plant Biology, 19
  • [4] Genome-wide transcriptional adaptation to salt stress in Populus
    Liu, Jin-Gui
    Han, Xiao
    Yang, Tong
    Cui, Wen-Hui
    Wu, Ai-Min
    Fu, Chun-Xiang
    Wang, Bai-Chen
    Liu, Li-Jun
    BMC PLANT BIOLOGY, 2019, 19 (01)
  • [5] Genome-wide studies of the transcriptional regulation by p53
    Li, Mangmang
    He, Yunlong
    Feng, Xi
    Huang, Jing
    BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS, 2012, 1819 (07): : 684 - 687
  • [7] Genome-wide comprehensive analysis of transcriptional regulation by ArgR in Thermus thermophilus
    Iwanaga, Naoki
    Ide, Kaori
    Nagashima, Takeshi
    Tomita, Takeo
    Agari, Yoshihiro
    Shinkai, Akeo
    Kuramitsu, Seiki
    Okada-Hatakeyema, Mariko
    Kuzuyama, Tomohisa
    Nishiyama, Makoto
    EXTREMOPHILES, 2014, 18 (06) : 995 - 1008
  • [8] The Role of α-CTD in the Genome-Wide Transcriptional Regulation of the Bacillus subtilis Cells
    Murayama, Satohiko
    Ishikawa, Shu
    Chumsakul, Onuma
    Ogasawara, Naotake
    Oshima, Taku
    PLOS ONE, 2015, 10 (07):
  • [9] Genome-wide comprehensive analysis of transcriptional regulation by ArgR in Thermus thermophilus
    Naoki Iwanaga
    Kaori Ide
    Takeshi Nagashima
    Takeo Tomita
    Yoshihiro Agari
    Akeo Shinkai
    Seiki Kuramitsu
    Mariko Okada-Hatakeyema
    Tomohisa Kuzuyama
    Makoto Nishiyama
    Extremophiles, 2014, 18 : 995 - 1008
  • [10] Genome-wide transcriptional regulation in Saccharomyces cerevisiae in response to carbon dioxide
    Tan, Lin-Rui
    Liu, Jing-Jing
    Deewan, Anshu
    Lee, Jae Won
    Xia, Peng-Fei
    Rao, Christopher, V
    Jin, Yong-Su
    Wang, Shu-Guang
    FEMS YEAST RESEARCH, 2022, 22 (01)