The Maximum Entropy Fallacy Redux?

被引：13
作者：
Aurell, Erik [1 ,2 ,3 ,4 ]
机构：
[1] KTH Royal Inst Technol, ACCESS Linnaeus Ctr, Dept Computat Biol, Stockholm, Sweden
[2] KTH Royal Inst Technol, Ctr Quantum Mat, Stockholm, Sweden
[3] Aalto Univ, Dept Informat & Comp Sci, Espoo, Finland
[4] Aalto Univ, Dept Appl Phys, Espoo, Finland
来源：
PLOS COMPUTATIONAL BIOLOGY | 2016年 / 12卷 / 05期
基金：
芬兰科学院;
关键词：
PROTEIN-STRUCTURE PREDICTION; DIRECT-COUPLING ANALYSIS; INFORMATION-THEORY; FLUCTUATIONS; CONTACTS;
D O I：
10.1371/journal.pcbi.1004777
中图分类号：
Q5 [生物化学];
学科分类号：
071010 ; 081704 ;
摘要：
[No abstract available]
引用
收藏
页数：7
相关论文
共 31 条
[1]  
Amari S. I., 1987, LECT NOTES MONOGRAPH, V10, DOI [10.1214/lnms/1215467059, DOI 10.1214/LNMS/1215467059]
[2]   Macroscopic fluctuation theory for stationary non-equilibrium states [J].
Bertini, L ;
De Sole, A ;
Gabrielli, D ;
Jona-Lasinio, G ;
Landim, C .
JOURNAL OF STATISTICAL PHYSICS, 2002, 107 (3-4) :635-675
[3]   Stochastic models of evolution in genetics, ecology and linguistics [J].
Blythe, R. A. ;
McKane, A. J. .
JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT, 2007,
[4]   Adaptation and irreversibility in microevolution [J].
Bo, Stefano ;
Mazzolini, Andrea ;
Celani, Antonio .
EPL, 2014, 108 (06)
[5]  
Brotto T, 2015, ARXIV150707453
[6]   Emerging methods in protein co-evolution [J].
de Juan, David ;
Pazos, Florencio ;
Valencia, Alfonso .
NATURE REVIEWS GENETICS, 2013, 14 (04) :249-261
[7]   Non-equilibrium steady states: fluctuations and large deviations of the density and of the current [J].
Derrida, Bernard .
JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT, 2007,
[8]   Fast pseudolikelihood maximization for direct-coupling analysis of protein structure from many homologous amino-acid sequences [J].
Ekeberg, Magnus ;
Hartonen, Tuomo ;
Aurell, Erik .
JOURNAL OF COMPUTATIONAL PHYSICS, 2014, 276 :341-356
[9]   Improving Contact Prediction along Three Dimensions [J].
Feinauer, Christoph ;
Skwark, Marcin J. ;
Pagnani, Andrea ;
Aurell, Erik .
PLOS COMPUTATIONAL BIOLOGY, 2014, 10 (10)
[10]   Three-Dimensional Structures of Membrane Proteins from Genomic Sequencing [J].
Hopf, Thomas A. ;
Colwell, Lucy J. ;
Sheridan, Robert ;
Rost, Burkhard ;
Sander, Chris ;
Marks, Debora S. .
CELL, 2012, 149 (07) :1607-1621
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