MAVEN: An Algorithm for Multi-Parametric Automated Segmentation of Brain Veins From Gradient Echo Acquisitions

被引:11
|
作者
Monti, Serena [1 ,2 ]
Cocozza, Sirio [3 ]
Borrelli, Pasquale [1 ]
Straub, Sina [4 ]
Ladd, Mark E. [4 ]
Salvatore, Marco [1 ]
Tedeschi, Enrico [3 ]
Palma, Giuseppe [5 ]
机构
[1] IRCCS SDN, I-80143 Naples, Italy
[2] Politecn Milan, Dept Elect Informat & Bioengn, I-20133 Milan, Italy
[3] Univ Federico II, Dept Adv Biomed Sci, I-80131 Naples, Italy
[4] German Canc Res Ctr, Dept Med Phys Radiol, D-69120 Heidelberg, Germany
[5] CNR, Inst Biostruct & Bioimaging, I-80145 Naples, Italy
关键词
Brain veins; vesselness; segmentation; MRI; DEEP MEDULLARY VEINS; VENOUS HEMODYNAMICS; MR VENOGRAPHY; SUSCEPTIBILITY; SYSTEM; LEUKOARAIOSIS; SCLEROSIS; MODEL; SWI;
D O I
10.1109/TMI.2016.2645286
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Cerebral vein analysis provides a chance to study, from an unusual viewpoint, an entire class of brain diseases, including neurodegenerative disorders and traumatic brain injuries. Manual segmentation approaches can be used to assess vascular anatomy, but they are observer-dependent and time-consuming; therefore, automated approaches are desirable, as they also improve reproducibility. In this paper, a new, fully automated algorithm, based on structural, morphological, and relaxometric information, is proposed to segment the entire cerebral venous system from MR images. The algorithm formulti-parametric automated segmentation of brain VEiNs (MAVEN) is based on a combined investigation of multi-parametric information that allows for rejection of false positives and detection of thin vessels. The method is tested on gradient echo brain data sets acquired at 1.5, 3, and 7 T. It is compared to previous methods against manual segmentation, and its inter-scan reproducibility is assessed. The achieved accuracy and reproducibility are good, meaning that MAVEN outperforms previous methods on both quantitative and qualitative analyses. It is usable at all the field strengths explored, showing comparable accuracy scores, with no need for algorithm parameter adjustments, and thus, it is a promising candidate for the characterization of the venous tree topology.
引用
收藏
页码:1054 / 1065
页数:12
相关论文
共 26 条
  • [21] Automated brain tumor segmentation from multi-slices FLAIR MRI images
    Eltayeb, Engy N.
    Salem, Nancy M.
    Al-Atabany, Walid
    BIO-MEDICAL MATERIALS AND ENGINEERING, 2019, 30 (04) : 449 - 462
  • [22] Accuracy of tumor segmentation from multi-parametric prostate MRI and 18F-choline PET/CT for focal prostate cancer therapy applications
    Piert, Morand
    Shankar, Prasad R.
    Montgomery, Jeffrey
    Kunju, Lakshmi Priya
    Rogers, Virginia
    Siddiqui, Javed
    Rajendiran, Thekkelnaycke
    Hearn, Jason
    George, Arvin
    Shao, Xia
    Davenport, Matthew S.
    EJNMMI RESEARCH, 2018, 8
  • [23] Accuracy of tumor segmentation from multi-parametric prostate MRI and 18F-choline PET/CT for focal prostate cancer therapy applications
    Morand Piert
    Prasad R. Shankar
    Jeffrey Montgomery
    Lakshmi Priya Kunju
    Virginia Rogers
    Javed Siddiqui
    Thekkelnaycke Rajendiran
    Jason Hearn
    Arvin George
    Xia Shao
    Matthew S. Davenport
    EJNMMI Research, 8
  • [24] Towards differentiation of brain tumor from radiation necrosis using multi-parametric MRI: Preliminary results at 4.7 T using rodent models
    Devan, Sean P.
    Jiang, Xiaoyu
    Kang, Hakmook
    Luo, Guozhen
    Xie, Jingping
    Zu, Zhongliang
    Stokes, Ashley M.
    Gore, John C.
    McKnight, Colin D.
    Kirschner, Austin N.
    Xu, Junzhong
    MAGNETIC RESONANCE IMAGING, 2022, 94 : 144 - 150
  • [25] Automated brain tumour segmentation from multi-modality magnetic resonance imaging data based on new particle swarm optimisation segmentation method
    Gtifa, Wafa
    Hamdaoui, Faycal
    Sakly, Anis
    INTERNATIONAL JOURNAL OF MEDICAL ROBOTICS AND COMPUTER ASSISTED SURGERY, 2023, 19 (03)
  • [26] Automated Brain Tumor Segmentation Based on Multi-Planar Superpixel Level Features Extracted From 3D MR Images
    Imtiaz, Tamjid
    Rifat, Shahriar
    Fattah, Shaikh Anowarul
    Wahid, Khan A.
    IEEE ACCESS, 2020, 8 : 25335 - 25349