Development of Activity-Based Proteomic Probes for Protein Citrullination

被引:9
|
作者
Nemmara, Venkatesh V. [1 ,2 ]
Thompson, Paul R. [1 ,2 ]
机构
[1] Univ Massachusetts, Sch Med, Dept Biochem & Mol Pharmacol, LRB 826,364 Plantat St, Worcester, MA 01605 USA
[2] Univ Massachusetts, Sch Med, Program Chem Biol, LRB 826,364 Plantat St, Worcester, MA 01605 USA
来源
ACTIVITY-BASED PROTEIN PROFILING | 2019年 / 420卷
关键词
ARGININE DEIMINASE 4; SCRAPIE-INFECTED MICE; PEPTIDYLARGININE DEIMINASE; PROTEIN-ARGININE-DEIMINASE-4; PAD4; STRUCTURAL BASIS; CL-AMIDINE; IN-VITRO; INHIBITION; ACID; HALOACETAMIDINE;
D O I
10.1007/82_2018_132
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Protein arginine deiminases (PADs) catalyze the post-translational deimination of peptidyl arginine to form peptidyl citrulline. This modification is increased in multiple inflammatory diseases and in certain cancers. PADs regulate a variety of signaling pathways including apoptosis, terminal differentiation, and transcriptional regulation. Activity-based protein profiling (ABPP) probes have been developed to understand the role of the PADs in vivo and to investigate the effect of protein citrullination in various pathological conditions. Furthermore, these ABPPs have been utilized as a platform for high-throughput inhibitor discovery. This review will showcase the development of ABPPs targeting the PADs. In addition, it provides a brief overview of PAD structure and function along with recent advances in PAD inhibitor development.
引用
收藏
页码:233 / 251
页数:19
相关论文
共 50 条
  • [1] Development of activity-based probes for the protein deacylase Sirt1
    Goetz, Christopher J.
    Sprague, Daniel J.
    Smith, Brian C.
    BIOORGANIC CHEMISTRY, 2020, 104
  • [2] Development of Activity-Based Chemical Probes for Human Sirtuins
    Graham, Elysian
    Rymarchyk, Stacia
    Wood, Marci
    Cen, Yana
    ACS CHEMICAL BIOLOGY, 2018, 13 (03) : 782 - 792
  • [3] Activity-based proteomic profiling: The application of photoaffinity probes in the target identification of bioactive molecules
    Wang, Jin
    Chen, Qinhua
    Shan, Yuanyuan
    Pan, Xiaoyan
    Zhang, Jie
    TRAC-TRENDS IN ANALYTICAL CHEMISTRY, 2019, 115 : 110 - 120
  • [4] Activity-based fluorescent probes for monitoring sulfatase activity
    Park, Hyun-Joo
    Rhee, Hyun-Woo
    Hong, Jong-In
    BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2012, 22 (15) : 4939 - 4941
  • [5] Activity-Based Fluorescent Probes Based on Hemicyanine for Biomedical Sensing
    Luo, Pan
    Wang, Min
    Liu, Wenguang
    Liu, Lin
    Xu, Peng
    MOLECULES, 2022, 27 (22):
  • [6] Activity-Based Probes for 15-Lipoxygenase-1
    Eleftheriadis, Nikolaos
    Thee, Stephanie A.
    Zwinderman, Martijn R. H.
    Leus, Niek G. J.
    Dekker, Frank J.
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2016, 55 (40) : 12300 - 12305
  • [7] Towards the development of activity-based probes for detection of lysine-specific demethylase-1 activity
    Ourailidou, Maria E.
    Lenoci, Alessia
    Zwergel, Clemens
    Rotili, Dante
    Mai, Antonello
    Dekker, Frank J.
    BIOORGANIC & MEDICINAL CHEMISTRY, 2017, 25 (03) : 847 - 856
  • [8] Detecting cathepsin activity in human osteoarthritis via activity-based probes
    Ben-Aderet, Louisa
    Merquiol, Emmanuelle
    Fahham, Duha
    Kumar, Ashok
    Reich, Eli
    Ben-Nun, Yael
    Kandel, Leonid
    Haze, Amir
    Liebergall, Meir
    Kosinska, Marta K.
    Steinmeyer, Juergen
    Turk, Boris
    Blum, Galia
    Dvir-Ginzberg, Mona
    ARTHRITIS RESEARCH & THERAPY, 2015, 17
  • [9] Hydrolysis-Resistant Ester-Based Linkers for Development of Activity-Based NIR Bioluminescence Probes
    Yadav, Anuj K.
    Zhao, Zhenxiang
    Weng, Yourong
    Gardner, Sarah H.
    Brady, Catharine J.
    Peguero, Oliver D. Pichardo
    Chan, Jefferson
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2023, 145 (02) : 1460 - 1469
  • [10] Design and Synthesis of Quenched Activity-based Probes for Diacylglycerol Lipase and α,β-Hydrolase Domain Containing Protein 6
    van Rooden, E. J.
    Kohsiek, M.
    Kreekel, R.
    van Esbroeck, A. C. M.
    van den Nieuwendijk, A. M. C. H.
    Janssen, A. P. A.
    van den Berg, R. J. B. H. N.
    Overkleeft, H. S.
    van der Stelt, M.
    CHEMISTRY-AN ASIAN JOURNAL, 2018, 13 (22) : 3491 - 3500