Bayesian spatiotemporal forecasting and mapping of COVID-19 risk with application to West Java']Java Province, Indonesia

被引:33
作者
Jaya, I. Gede Nyoman M. [1 ,2 ]
Folmer, Henk [1 ]
机构
[1] Univ Groningen, Fac Spatial Sci, Dept Econ Geog, Groningen, Netherlands
[2] Padjadjaran State Univ, Dept Stat, Jalan Raya Bandung Sumedang,Km 21 Jatinangor, Bandung 45363, Indonesia
关键词
Bayesian analysis; COVID-19; forecasting; hotspot; mapping; pure model; spatiotemporal distribution; SPATIAL AUTOCORRELATION; DISEASE; MODELS; TIME; CANCER; OVERDISPERSION; REGRESSION; POISSON; IMPACT; CAR;
D O I
10.1111/jors.12533
中图分类号
F [经济];
学科分类号
02 ;
摘要
The coronavirus disease (COVID-19) has spread rapidly to multiple countries including Indonesia. Mapping its spatiotemporal pattern and forecasting (small area) outbreaks are crucial for containment and mitigation strategies. Hence, we introduce a parsimonious space-time model of new infections that yields accurate forecasts but only requires information regarding the number of incidences and population size per geographical unit and time period. Model parsimony is important because of limited knowledge regarding the causes of COVID-19 and the need for rapid action to control outbreaks. We outline the basics of Bayesian estimation, forecasting, and mapping, in particular for the identification of hotspots. The methodology is applied to county-level data of West Java Province, Indonesia.
引用
收藏
页码:849 / 881
页数:33
相关论文
共 108 条
[21]   BAYESIAN SMOOTHING OF RATES IN SMALL GEOGRAPHIC AREAS [J].
CRESSIE, N .
JOURNAL OF REGIONAL SCIENCE, 1995, 35 (04) :659-673
[22]   Bayesian approach for nonlinear random effects models [J].
Dey, DK ;
Chen, MH ;
Chang, H .
BIOMETRICS, 1997, 53 (04) :1239-1252
[23]   Y Review and analysis of current responses to COVID-19 in Indonesia: Period of January to March 2020 [J].
Djalante, Riyanti ;
Lassa, Jonatan ;
Setiamarga, Davin ;
Sudjatma, Aruminingsih ;
Indrawan, Mochamad ;
Haryanto, Budi ;
Mahfud, Choirul ;
Sinapoy, Muhammad Sabaruddin ;
Djalante, Susanti ;
Rafliana, Irina ;
Gunawan, Lalu Adi ;
Surtiari, Gusti Ayu Ketut ;
Warsilah, Henny .
PROGRESS IN DISASTER SCIENCE, 2020, 6
[24]  
Dobricic S., 2020, ENV FACTORS SUCH WEA
[25]   Univariate versus multivariate time series forecasting: an application to international tourism demand [J].
du Preez, J ;
Witt, SF .
INTERNATIONAL JOURNAL OF FORECASTING, 2003, 19 (03) :435-451
[26]   Spatial smoothing in Bayesian models: a comparison of weights matrix specifications and their impact on inference [J].
Duncan, Earl W. ;
White, Nicole M. ;
Mengersen, Kerrie .
INTERNATIONAL JOURNAL OF HEALTH GEOGRAPHICS, 2017, 16
[27]   Commentary: Practical advantages of Bayesian analysis of epidemiologic data [J].
Dunson, DB .
AMERICAN JOURNAL OF EPIDEMIOLOGY, 2001, 153 (12) :1222-1226
[28]  
Gelman A., 2013, Bayesian data analysis, DOI DOI 10.1201/B16018
[29]   Prior distributions for variance parameters in hierarchical models(Comment on an Article by Browne and Draper) [J].
Gelman, Andrew .
BAYESIAN ANALYSIS, 2006, 1 (03) :515-533
[30]   Coagulation disorders in coronavirus infected patients: COVID-19, SARS- CoV-1, MERS-CoV and lessons from the past [J].
Giannis, Dimitrios ;
Ziogas, Ioannis A. ;
Gianni, Panagiota .
JOURNAL OF CLINICAL VIROLOGY, 2020, 127