Temporal Dynamics of Bacterial and Fungal Colonization on Plastic Debris in the North Sea

被引:270
作者
De Tender, Caroline [1 ,2 ]
Devriese, Lisa I. [1 ,3 ]
Haegeman, Annelies [1 ]
Maes, Sara [1 ]
Vangeyte, Jurgen [1 ]
Cattrijsse, Andre [4 ]
Dawyndt, Peter [2 ]
Ruttink, Tom [1 ]
机构
[1] Inst Agr Fisheries & Food Res ILVO, Burgemeester Van Gansberghelaan 92, B-9820 Merelbeke, Belgium
[2] Univ Ghent, Dept Appl Math Comp Sci & Stat, Krijgslaan 281 S9, B-9000 Ghent, Belgium
[3] Vrije Univ Amsterdam, Dept Environm & Hlth, De Boelelaan 1087, NL-1081 HV Amsterdam, Netherlands
[4] Flanders Marine Inst, InnovOcean Site,Wandelaarkaai 7, B-8400 Oostende, Belgium
关键词
LOW-DENSITY POLYETHYLENE; MICROBIAL BIOFILMS; BELGIAN PART; MARINE; BIODEGRADATION; DEGRADATION; COMMUNITIES;
D O I
10.1021/acs.est.7b00697
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Despite growing evidence that biofilm formation on plastic debris in the marine environment may be essential for its biodegradation, the underlying processes have yet to be fully understood. Thus, far, bacterial biofilm formation had only been studied after short-term exposure or on floating plastic, yet a prominent share of plastic litter accumulates on the seafloor. In this study, we explored the taxonomic composition of bacterial and fungal communities on polyethylene plastic sheets and dolly ropes during longterm exposure on the seafloor, both at a harbor and an:offshore location in the Belgian part of the North Sea. We reconstructed the sequence of events during biofilin formation on plastic in the harbor environment and identified a core bacteriome and subsets of bacterial indicator species for early, intermediate, and late stages of biofilm formation. Additionally, by implementing ITS2 metabarcoding on plastic debris, we identified and characterized for the first time fungal genera on plastic debris. Surprisingly, none of the plastics exposed to offshore conditions displayed the typical signature of a late stage biofilm, suggesting that biofilm formation is severely hampered in the natural environment where most plastic debris accumulates. [GRAPHICS]
引用
收藏
页码:7350 / 7360
页数:11
相关论文
共 49 条
[1]  
ALTSCHUL SF, 1990, J MOL BIOL, V215, P403, DOI 10.1006/jmbi.1990.9999
[2]  
[Anonymous], LIFEWATCH OBS DAT CT
[3]  
[Anonymous], 1991, Appl. Environ. Microbiol.
[4]  
[Anonymous], PLAST FACT
[5]  
[Anonymous], ZALERION MARITIMUM S
[6]   Biofouling and stability of synthetic polymers in sea water [J].
Artham, Trishul ;
Sudhakar, M. ;
Venkatesan, R. ;
Nair, C. Madhavan ;
Murty, K. V. G. K. ;
Doble, Mukesh .
INTERNATIONAL BIODETERIORATION & BIODEGRADATION, 2009, 63 (07) :884-890
[7]   High-density polyethylene (HDPE)-degrading potential bacteria from marine ecosystem of Gulf of Mannar, India [J].
Balasubramanian, V. ;
Natarajan, K. ;
Hemambika, B. ;
Ramesh, N. ;
Sumathi, C. S. ;
Kottaimuthu, R. ;
Kannan, V. Rajesh .
LETTERS IN APPLIED MICROBIOLOGY, 2010, 51 (02) :205-211
[8]   Accumulation and fragmentation of plastic debris in global environments [J].
Barnes, David K. A. ;
Galgani, Francois ;
Thompson, Richard C. ;
Barlaz, Morton .
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2009, 364 (1526) :1985-1998
[9]   QIIME allows analysis of high-throughput community sequencing data [J].
Caporaso, J. Gregory ;
Kuczynski, Justin ;
Stombaugh, Jesse ;
Bittinger, Kyle ;
Bushman, Frederic D. ;
Costello, Elizabeth K. ;
Fierer, Noah ;
Pena, Antonio Gonzalez ;
Goodrich, Julia K. ;
Gordon, Jeffrey I. ;
Huttley, Gavin A. ;
Kelley, Scott T. ;
Knights, Dan ;
Koenig, Jeremy E. ;
Ley, Ruth E. ;
Lozupone, Catherine A. ;
McDonald, Daniel ;
Muegge, Brian D. ;
Pirrung, Meg ;
Reeder, Jens ;
Sevinsky, Joel R. ;
Tumbaugh, Peter J. ;
Walters, William A. ;
Widmann, Jeremy ;
Yatsunenko, Tanya ;
Zaneveld, Jesse ;
Knight, Rob .
NATURE METHODS, 2010, 7 (05) :335-336
[10]   PyNAST: a flexible tool for aligning sequences to a template alignment [J].
Caporaso, J. Gregory ;
Bittinger, Kyle ;
Bushman, Frederic D. ;
DeSantis, Todd Z. ;
Andersen, Gary L. ;
Knight, Rob .
BIOINFORMATICS, 2010, 26 (02) :266-267