Meta-analysis of Voxel-Based Neuroimaging Studies using Seed-based d Mapping with Permutation of Subject Images (SDM-PSI)

被引:94
作者
Albajes-Eizagirre, Anton [1 ,2 ]
Solanes, Aleix [1 ,2 ]
Angel Fullana, Miquel [2 ,3 ]
Ioannidis, John P. A. [4 ,5 ,6 ,7 ]
Fusar-Poli, Paolo [8 ,9 ,10 ]
Torrent, Carla [1 ,2 ,3 ,11 ]
Sole, Brisa [1 ,2 ,3 ,11 ]
Mar Bonnin, Caterina [1 ,2 ,3 ,11 ]
Vieta, Eduard [1 ,2 ,3 ,11 ]
Mataix-Cols, David [12 ]
Radua, Joaquim [1 ,2 ,8 ,12 ]
机构
[1] Inst Invest Biomed August Pi & Sunyer IDIBAPS, Barcelona, Spain
[2] Mental Hlth Res Networking Ctr CIBERSAM, Barcelona, Spain
[3] Hosp Clin Barcelona, Inst Neurosci, Barcelona, Spain
[4] Stanford Univ, Sch Med, Dept Med, Stanford, CA 94305 USA
[5] Stanford Univ, Sch Med, Dept Hlth Res & Policy, Stanford, CA 94305 USA
[6] Stanford Univ, Sch Med, Dept Biomed Data Sci, Stanford, CA 94305 USA
[7] Stanford Univ, Sch Humanities & Sci, Dept Stat, Stanford, CA 94305 USA
[8] Kings Coll London, Inst Psychiat Psychol & Neurosci, Dept Psychosis Studies, London, England
[9] South London & Maudsley NHS Fdn Trust, OASIS Serv, London, England
[10] Univ Pavia, Dept Nervous Syst & Behav Sci, Pavia, Italy
[11] Univ Barcelona, Barcelona, Spain
[12] Karolinska Inst, Dept Clin Neurosci, Ctr Psychiat Res & Educ, Stockholm, Sweden
来源
JOVE-JOURNAL OF VISUALIZED EXPERIMENTS | 2019年 / 153期
关键词
Neuroscience; Issue; 153; familywise error rate; functional magnetic resonance imaging (fMRI); meta-analysis; neuroimaging; permutation of subject images (PSI); seed-based d mapping (SDM); threshold-free cluster enhancement (TFCE); voxel-based morphometry (VBM); INFERENCE;
D O I
10.3791/59841
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Most methods for conducting meta-analysis of voxel-based neuroimaging studies do not assess whether effects are not null, but whether there is a convergence of peaks of statistical significance, and reduce the assessment of the evidence to a binary classification exclusively based on p-values (i.e., voxels can only be "statistically significant" or "non-statistically significant"). Here, we detail how to conduct a meta-analysis using Seed-based d Mapping with Permutation of Subject Images (SDM-PSI), a novel method that uses a standard permutation test to assess whether effects are not null. We also show how to grade the strength of the evidence according to a set of criteria that considers a range of statistical significance levels (from more liberal to more conservative), the amount of data or the detection of potential biases (e.g., small-study effect and excess of significance). To exemplify the procedure, we detail the conduction of a meta-analysis of voxel-based morphometry studies in obsessive-compulsive disorder, and we provide all the data already extracted from the manuscripts to allow the reader to replicate the meta-analysis easily. SDM-PSI can also be used for meta-analyses of functional magnetic resonance imaging, diffusion tensor imaging, position emission tomography and surface-based morphometry studies.
引用
收藏
页数:7
相关论文
共 22 条
[1]   Voxel-based meta-analysis via permutation of subject images (PSI): Theory and implementation for SDM [J].
Albajes-Eizagirre, Anton ;
Solanes, Aleix ;
Vieta, Eduard ;
Radua, Joaquim .
NEUROIMAGE, 2019, 186 :174-184
[2]   What do results from coordinate-based meta-analyses tell us? [J].
Albajes-Eizagirre, Anton ;
Radua, Joaquim .
NEUROIMAGE, 2018, 176 :550-553
[3]  
[Anonymous], 2018, STAT METHODS MED RES
[4]   The Influence of Study-Level Inference Models and Study Set Size on Coordinate-Based fMRI Meta-Analyses [J].
Bossier, Han ;
Seurinck, Ruth ;
Kuehn, Simone ;
Banaschewski, Tobias ;
Barker, Gareth J. ;
Bokde, Arun L. W. ;
Martinot, Jean-Luc ;
Lemaitre, Herve ;
Paus, Tomas ;
Millenet, Sabina ;
Moerkerke, Beatrijs .
FRONTIERS IN NEUROSCIENCE, 2018, 11
[5]   Post-hoc power estimation for topological inference in fMRI [J].
Durnez, Joke ;
Moerkerke, Beatrijs ;
Nichols, Thomas E. .
NEUROIMAGE, 2014, 84 :45-64
[6]   Activation likelihood estimation meta-analysis revisited [J].
Eickhoff, Simon B. ;
Bzdok, Danilo ;
Laird, Angela R. ;
Kurth, Florian ;
Fox, Peter T. .
NEUROIMAGE, 2012, 59 (03) :2349-2361
[7]   Coordinate-Based Activation Likelihood Estimation Meta-Analysis of Neuroimaging Data: A Random-Effects Approach Based on Empirical Estimates of Spatial Uncertainty [J].
Eickhoff, Simon B. ;
Laird, Angela R. ;
Grefkes, Christian ;
Wang, Ling E. ;
Zilles, Karl ;
Fox, Peter T. .
HUMAN BRAIN MAPPING, 2009, 30 (09) :2907-2926
[8]   Fear extinction in the human brain: A meta-analysis of fMRI studies in healthy participants [J].
Fullana, Miquel A. ;
Albajes-Eizagirre, Anton ;
Soriano-Mas, Caries ;
Vervliet, Bram ;
Cardoner, Narcis ;
Benet, Olivia ;
Radua, Joaquim ;
Harrison, Ben J. .
NEUROSCIENCE AND BIOBEHAVIORAL REVIEWS, 2018, 88 :16-25
[9]   Meta-analytic Comparison Between PIB-PET and FDG-PET Results in Alzheimer's Disease and MCI [J].
He, Wei ;
Liu, Dinghua ;
Radua, Joaquim ;
Li, GuoQing ;
Han, Bojun ;
Sun, Zhigang .
CELL BIOCHEMISTRY AND BIOPHYSICS, 2015, 71 (01) :17-26
[10]   ALE meta-analysis: Controlling the false discovery rate and performing statistical contrasts [J].
Laird, AR ;
Fox, PM ;
Price, CJ ;
Glahn, DC ;
Uecker, AM ;
Lancaster, JL ;
Turkeltaub, PE ;
Kochunov, P ;
Fox, PT .
HUMAN BRAIN MAPPING, 2005, 25 (01) :155-164