1H, 13C and 15N resonance assignments of human DCL-1 (CD302) extracellular domain

被引:3
作者
Pospisilova, Elika [1 ,2 ]
Kavan, Daniel [1 ,2 ]
Novak, Petr [1 ,2 ]
Chmelik, Josef [1 ,2 ]
机构
[1] Charles Univ Prague, Dept Biochem, Fac Sci, Prague, Czech Republic
[2] Acad Sci Czech Republ, Inst Microbiol, Prague, Czech Republic
关键词
DCL-1 (CD302); C-type lectin like receptor; Protein NMR; Heteronuclear NMR spectroscopy; Resonance assignment; FUSION PROTEIN; INTERNALIZATION; HIV-1; CD205; CELLS; NMR;
D O I
10.1007/s12104-015-9664-5
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
DCL-1 (CD302) is a single-pass type one transmembrane protein which is predominantly expressed on myeloid cell lines. It possess the ability of endocytosis and is assumed to play a role in cell adhesion and migration. It has been also connected to several illnesses but more on the level of mRNA than on the protein expression level. More interestingly it is alternatively expressed in the form of a fusion protein with another single-pass type one transmembrane protein DEC205 (CD205) which is normally involved in antigen-uptake and endocytosis. The fusion protein has been assigned to have altered function compared to the wild type proteins. We have performed NMR structural analysis of the 16.2 kDa extracellular domain of DCL-1 to get a better insight onto this molecule. We have been able to assign nearly 97 % of resonance frequencies for the N-15 and C-13 labeled recombinant protein. The assignments have been deposited into Biological Magnetic Resonance Data Bank under the accession number 25802.
引用
收藏
页码:189 / 192
页数:4
相关论文
共 12 条
[1]   Altered expression and endocytic function of CD205 in human dendritic cells, and detection of a CD205-DCL-1 fusion protein upon dendritic cell maturation [J].
Butler, Matt ;
Morel, Anne-Sophie ;
Jordan, William J. ;
Eren, Efrem ;
Hue, Susan ;
Shrimpton, Rachel E. ;
Ritter, Mary A. .
IMMUNOLOGY, 2007, 120 (03) :362-371
[2]   NMRPIPE - A MULTIDIMENSIONAL SPECTRAL PROCESSING SYSTEM BASED ON UNIX PIPES [J].
DELAGLIO, F ;
GRZESIEK, S ;
VUISTER, GW ;
ZHU, G ;
PFEIFER, J ;
BAX, A .
JOURNAL OF BIOMOLECULAR NMR, 1995, 6 (03) :277-293
[3]  
Goddard T. D., 2008, SPARKY, V3
[4]   DEC-205-mediated internalization of HIV-1 results in the establishment of silent infection in renal tubular cells [J].
Hatsukari, Ikusuke ;
Singh, Priyanka ;
Hitosugi, Naoko ;
Messmer, Davorka ;
Valderrama, Elsa ;
Teichberg, Saul ;
Chaung, Wayne ;
Gross, Eleanore ;
Schmidtmayerova, Helena ;
Singhal, Pravin C. .
JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY, 2007, 18 (03) :780-787
[5]   Hodgkin's lymphoma cell lines express a fusion protein encoded by intergenically spliced mRNA for the multilectin receptor DEC-205 (CD205) and a novel C-type lectin receptor DCL-1 [J].
Kato, M ;
Khan, S ;
Gonzalez, N ;
O'Neill, BP ;
McDonald, KJ ;
Cooper, BJ ;
Angel, NZ ;
Hart, DNJ .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2003, 278 (36) :34035-34041
[6]   The novel endocytic and phagocytic C-type lectin receptor DCL-1/CD302 on macrophages is colocalized with F-actin, suggesting a role in cell adhesion and migration [J].
Kato, Masato ;
Khan, Seema ;
d'Aniello, Elisabetta ;
McDonald, Kylie J. ;
Hart, Derek N. J. .
JOURNAL OF IMMUNOLOGY, 2007, 179 (09) :6052-6063
[7]   DC-specific ICAM-3-grabbing nonintegrin mediates internalization of HIV-1 into human podocytes [J].
Mikulak, J. ;
Teichberg, S. ;
Arora, S. ;
Kumar, D. ;
Yadav, A. ;
Salhan, D. ;
Pullagura, S. ;
Mathieson, P. W. ;
Saleem, M. A. ;
Singhal, P. C. .
AMERICAN JOURNAL OF PHYSIOLOGY-RENAL PHYSIOLOGY, 2010, 299 (03) :F664-F673
[8]   High-level expression of soluble form of mouse natural killer cell receptor NKR-P1C(B6) in Escherichia coli [J].
Rozbesky, Daniel ;
Kavan, Daniel ;
Chmelik, Josef ;
Novak, Petr ;
Vanek, Ondrej ;
Bezouska, Karel .
PROTEIN EXPRESSION AND PURIFICATION, 2011, 77 (02) :178-184
[9]   Protein backbone and sidechain torsion angles predicted from NMR chemical shifts using artificial neural networks [J].
Shen, Yang ;
Bax, Ad .
JOURNAL OF BIOMOLECULAR NMR, 2013, 56 (03) :227-241
[10]   Prediction of Xaa-Pro peptide bond conformation from sequence and chemical shifts [J].
Shen, Yang ;
Bax, Ad .
JOURNAL OF BIOMOLECULAR NMR, 2010, 46 (03) :199-204