Large gain in translational entropy of water is a major driving force in protein folding

被引:88
作者
Harano, Y [1 ]
Kinoshita, M [1 ]
机构
[1] Kyoto Univ, Inst Adv Energy, Uji, Kyoto 6110011, Japan
关键词
D O I
10.1016/j.cplett.2004.09.140
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A view lacking in earlier studies on protein folding is that the process is critically influenced by the thermal motion of water molecules. Here it is pointed out that there is a powerful driving force, a large gain in the translational entropy (TE) of water, which competes with the large loss of the conformational entropy in the folding. We analyze the TE of water in which a protein molecule with a prescribed conformation is immersed. We consider a number of conformations and show that the largest TE is attained only in the native structure. (C) 2004 Elsevier B.V. All rights reserved.
引用
收藏
页码:342 / 348
页数:7
相关论文
共 30 条
[1]   Insights into phase transition kinetics from colloid science [J].
Anderson, VJ ;
Lekkerkerker, HNW .
NATURE, 2002, 416 (6883) :811-815
[2]   INTERACTION BETWEEN PARTICLES SUSPENDED IN SOLUTIONS OF MACROMOLECULES [J].
ASAKURA, S ;
OOSAWA, F .
JOURNAL OF POLYMER SCIENCE, 1958, 33 (126) :183-192
[3]   An investigation of the influence of solute size and insertion conditions on solvation thermodynamics [J].
Cann, NM ;
Patey, GN .
JOURNAL OF CHEMICAL PHYSICS, 1997, 106 (19) :8165-8195
[4]   Entropic forces in binary hard sphere mixtures: Theory and simulation [J].
Dickman, R ;
Attard, P ;
Simonian, V .
JOURNAL OF CHEMICAL PHYSICS, 1997, 107 (01) :205-213
[5]   DOMINANT FORCES IN PROTEIN FOLDING [J].
DILL, KA .
BIOCHEMISTRY, 1990, 29 (31) :7133-7155
[6]   Entropic control of particle motion using passive surface microstructures [J].
Dinsmore, AD ;
Yodh, AG ;
Pine, DJ .
NATURE, 1996, 383 (6597) :239-242
[7]   Protein folding and misfolding [J].
Dobson, CM .
NATURE, 2003, 426 (6968) :884-890
[8]  
DOIG AJ, 1995, PROTEIN SCI, V4, P2247, DOI 10.1002/pro.5560041101
[9]   A measure of conformational entropy change during thermal protein unfolding using neutron spectroscopy [J].
Fitter, J .
BIOPHYSICAL JOURNAL, 2003, 84 (06) :3924-3930
[10]  
FLORY PJ, 1953, PRINCIPLE POLYMER CH