Genetic association of complement component 2 variants with chronic hepatitis B in a Korean population

被引:5
作者
Namgoong, Suhg [1 ]
Shin, Joong-Gon [2 ]
Cheong, Hyun Sub [3 ]
Kim, Lyoung Hyo [3 ]
Kim, Ji On [3 ]
Seo, Jung Yeon [1 ]
Shin, Hyoung Doo [1 ,2 ]
Kim, Yoon Jun [4 ,5 ]
机构
[1] Sogang Univ, Dept Life Sci, Seoul, South Korea
[2] Sogang Univ, Res Inst Basic Sci, Seoul, South Korea
[3] SNP Genet Inc, Dept Genet Epidemiol, Seoul, South Korea
[4] Seoul Natl Univ, Dept Internal Med, Seoul, South Korea
[5] Seoul Natl Univ, Liver Res Inst, Seoul, South Korea
基金
新加坡国家研究基金会;
关键词
chronic hepatitis B; complement component 2; genetic risk score; single nucleotide polymorphism; GENOME-WIDE ASSOCIATION; MACULAR DEGENERATION; RISK-FACTORS; POLYMORPHISMS; HLA; TYPE-1; LOCUS;
D O I
10.1111/liv.13675
中图分类号
R57 [消化系及腹部疾病];
学科分类号
摘要
Background & Aims: Numerous single nucleotide polymorphisms associated with an increased risk of liver diseases, chronic hepatitis B and chronic hepatitis B-related hepatocellular carcinoma have been identified. In this study, we scrutinized the genetic effects of C2 variants, which were conflicting in previous results, on the risk of chronic hepatitis B in a Korean population. Methods: We genotyped 22 common C2 genetic variants of 977 chronic hepatitis B cases including 302 chronic hepatitis B-related hepatocellular carcinoma cases and 785 population controls. Statistical analysis was performed to examine the effects of genotype on the risk of chronic hepatitis B and chronic hepatitis B-related hepatocellular carcinoma. Results: Logistic regression analyses showed that six C2 single nucleotide polymorphisms had significant associations with the risk of chronic hepatitis B and chronic hepatitis B-related hepatocellular carcinoma among the Korean subjects. Step-wise analysis revealed that causal markers (rs9267665 and rs10947223) were identified among the C2 variants (stepwise P = 3.32 x 10(-9) and 2.04 x 10(-5) respectively). In further conditional analysis with previous chronic hepatitis B-associated loci, these two single nucleotide polymorphisms were independently associated with the risk of chronic hepatitis B. In addition, we investigated the ability of genetic risk scores combining 12 multi-chronic hepatitis B loci to predict the risk of chronic hepatitis B. Individuals with higher genetic risk scores showed increased risk for chronic hepatitis B. Conclusions: Our results suggested that the C2 gene might be a susceptibility locus for chronic hepatitis B in Korean populations. The cumulative genetic effects may contribute to future etiological explanations for chronic hepatitis B.
引用
收藏
页码:1576 / 1582
页数:7
相关论文
共 31 条
  • [1] Agarwala R, 2018, NUCLEIC ACIDS RES, V46, pD8, DOI [10.1093/nar/gks1189, 10.1093/nar/gkx1095, 10.1093/nar/gkq1172]
  • [2] Management of Hepatocellular Carcinoma: An Update
    Bruix, Jordi
    Sherman, Morris
    [J]. HEPATOLOGY, 2011, 53 (03) : 1020 - 1022
  • [3] Association of VARS2-SFTA2 polymorphisms with the risk of chronic hepatitis B in a Korean population
    Cheong, Hyun Sub
    Lee, Jeong-Hoon
    Yu, Su Jong
    Yoon, Jung-Hwan
    Lee, Hyo-Suk
    Cheong, Jae Youn
    Cho, Sung Won
    Park, Neung Hwa
    Park, Byung Lae
    Namgoong, Suhg
    Kim, Lyoung Hyo
    Shin, Hyoung Doo
    Kim, Yoon-Jun
    [J]. LIVER INTERNATIONAL, 2015, 35 (08) : 1934 - 1940
  • [4] Genetic Variations at Loci Involved in the Immune Response Are Risk Factors for Hepatocellular Carcinoma
    Clifford, Robert J.
    Zhang, Jinghui
    Meerzaman, Daoud M.
    Lyu, Myung-Soo
    Hu, Ying
    Cultraro, Constance M.
    Finney, Richard P.
    Kelley, Jenny M.
    Efroni, Sol
    Greenblum, Sharon I.
    Nguyen, Cu V.
    Rowe, William L.
    Sharma, Sweta
    Wu, Gang
    Yan, Chunhua
    Zhang, Hongen
    Chung, Young-Hwa
    Kim, Jeong A.
    Park, Neung Hwa
    Song, Il Han
    Buetow, Kenneth H.
    [J]. HEPATOLOGY, 2010, 52 (06) : 2034 - 2043
  • [5] A unified stepwise regression procedure for evaluating the relative effects of polymorphisms within a gene using case/control or family data:: Application to HLA in type 1 diabetes
    Cordell, HJ
    Clayton, DG
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2002, 70 (01) : 124 - 141
  • [6] A Risk Score for Predicting Multiple Sclerosis
    Dobson, Ruth
    Ramagopalan, Sreeram
    Topping, Joanne
    Smith, Paul
    Solanky, Bhavana
    Schmierer, Klaus
    Chard, Declan
    Giovannoni, Gavin
    [J]. PLOS ONE, 2016, 11 (11):
  • [7] Genetic variants in human leukocyte antigen/DP-DQ influence both hepatitis B virus clearance and hepatocellular carcinoma development
    Hu, Lingmin
    Zhai, Xiangjun
    Liu, Jibin
    Chu, Minjie
    Pan, Shandong
    Jiang, Jie
    Zhang, Yixin
    Wang, Hua
    Chen, Jianguo
    Shen, Hongbing
    Hu, Zhibin
    [J]. HEPATOLOGY, 2012, 55 (05) : 1426 - 1431
  • [8] Genetic variations in STAT4, C2, HLA-DRB1 and HLA-DQ associated with risk of hepatitis B virus-related liver cirrhosis
    Jiang, De-Ke
    Ma, Xiao-Pin
    Wu, Xiaopan
    Peng, Lijun
    Yin, Jianhua
    Dan, Yunjie
    Huang, Hui-Xing
    Ding, Dong-Lin
    Zhang, Lu-Yao
    Shi, Zhuqing
    Zhang, Pengyin
    Yu, Hongjie
    Sun, Jielin
    Zheng, S. Lilly
    Deng, Guohong
    Xu, Jianfeng
    Liu, Ying
    Guo, Jinsheng
    Cao, Guangwen
    Yu, Long
    [J]. SCIENTIFIC REPORTS, 2015, 5
  • [9] Genetic variants in STAT4 and HLA-DQ genes confer risk of hepatitis B virus-related hepatocellular carcinoma
    Jiang, De-Ke
    Sun, Jielin
    Cao, Guangwen
    Liu, Yao
    Lin, Dongxin
    Gao, Yu-Zhen
    Ren, Wei-Hua
    Long, Xi-Dai
    Zhang, Hongxing
    Ma, Xiao-Pin
    Wang, Zhong
    Jiang, Wei
    Chen, Tao-Yang
    Gao, Yong
    Sun, Liang-Dan
    Long, Ji-Rong
    Huang, Hui-Xing
    Wang, Dan
    Yu, Hongjie
    Zhang, Pengyin
    Tang, Li-Sha
    Peng, Bo
    Cai, Hao
    Liu, Ting-Ting
    Zhou, Ping
    Liu, Fang
    Lin, Xiaoling
    Tao, Sha
    Wan, Bo
    Sai-Yin, He-Xi Ge
    Qin, Lun-Xiu
    Yin, Jianhua
    Liu, Li
    Wu, Chen
    Pei, Yan
    Zhou, Yuan-Feng
    Zhai, Yun
    Lu, Pei-Xin
    Tan, Aihua
    Zuo, Xian-Bo
    Fan, Jia
    Chang, Jiang
    Gu, Xiaoli
    Wang, Neng-Jin
    Li, Yang
    Liu, Yin-Kun
    Zhai, Kan
    Zhang, Hongwei
    Hu, Zhibin
    Liu, Jun
    [J]. NATURE GENETICS, 2013, 45 (01) : 72 - U105
  • [10] A genome-wide association study identifies variants in the HLA-DP locus associated with chronic hepatitis B in Asians
    Kamatani, Yoichiro
    Wattanapokayakit, Sukanya
    Ochi, Hidenori
    Kawaguchi, Takahisa
    Takahashi, Atsushi
    Hosono, Naoya
    Kubo, Michiaki
    Tsunoda, Tatsuhiko
    Kamatani, Naoyuki
    Kumada, Hiromitsu
    Puseenam, Aekkachai
    Sura, Thanyachai
    Daigo, Yataro
    Chayama, Kazuaki
    Chantratita, Wasun
    Nakamura, Yusuke
    Matsuda, Koichi
    [J]. NATURE GENETICS, 2009, 41 (05) : 591 - 595