Complete mitochondrial genome of Rivularia auriculata (Gastropoda, Viviparidae) with phylogenetic consideration

被引:0
作者
Zhang, Chunxia [1 ]
Guo, Jing [1 ,2 ]
Yang, Huirong [3 ]
Zhang, Jia-En [1 ,4 ,5 ,6 ]
机构
[1] South China Agr Univ, Coll Nat Resources & Environm, Guangzhou 510642, Guangdong, Peoples R China
[2] Shaoguan Univ, Henry Fok Coll Life Sci, Shaoguan, Peoples R China
[3] South China Agr Univ, Coll Marine Sci, Guangzhou, Guangdong, Peoples R China
[4] Guangdong Prov Key Lab Ecocircular Agr, Guangzhou, Guangdong, Peoples R China
[5] Minist Agr, Key Lab Agroenvironm Trop, Guangzhou, Guangdong, Peoples R China
[6] Guangdong Prov Engn Technol Res Ctr Modern Ecoagr, Guangzhou, Guangdong, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期
基金
中国国家自然科学基金;
关键词
Rivularia auriculata; mitochondrial genome; NGS technique; SNAIL;
D O I
10.1080/23802359.2019.1688696
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Complete mitochondrial genome sequence of Rivularia auriculata has a circular genome of 16,552 bp, which is comprised 13 protein-coding genes, 2 rRNA genes, and 22 tRNA genes. The nucleotide composition of the light strand is 43.16% of A, 26.78% of T, 20.18% of C, and 9.88% of G. All genes are encoded on the heavy strand except seven tRNA genes (Met, Tyr, Cys, Trp, Gln, Gly, and Glu) on the light strand. All the protein-coding genes start with ATC initiation codon except ND4 starts with GTG, and two types of inferred termination codons are TAA and TAG. There are 26 intergenic spacers and 4 gene overlaps. It is indicated that R. auriculata has closer genetic relationship with Viviparus chui (88.64% nucleotide sequence identity between them) than the other snail species.
引用
收藏
页码:4049 / 4050
页数:2
相关论文
共 9 条
[1]  
Green M. R., 2012, Molecular cloning
[2]  
[潘洪超 Pan Hongchao], 2010, [生态科学, Ecologic Science], V29, P456
[3]  
Tamura K, 2013, MOL BIOL EVOL, V30, P2725, DOI [10.1093/molbev/mst197, 10.1093/molbev/msr121]
[4]   ANIMAL MITOCHONDRIAL-DNA - STRUCTURE AND EVOLUTION [J].
WOLSTENHOLME, DR .
INTERNATIONAL REVIEW OF CYTOLOGY-A SURVEY OF CELL BIOLOGY, 1992, 141 :173-216
[5]   The complete mitochondrial genome of the golden apple snail Pomacea canaliculata (Gastropoda: Ampullariidae) [J].
Yang, Huirong ;
Zhang, Jia-en ;
Deng, Zhixin ;
Luo, Hao ;
Guo, Jing ;
He, Simei ;
Luo, Mingzhu ;
Zhao, Benliang .
MITOCHONDRIAL DNA PART B-RESOURCES, 2016, 1 (01) :45-47
[6]   The complete mitochondrial genome of the mudsnail Cipangopaludina cathayensis (Gastropoda: Viviparidae) [J].
Yang, Huirong ;
Zhang, Jia-en ;
Luo, Hao ;
Luo, Mingzhu ;
Guo, Jing ;
Deng, Zhixin ;
Zhao, Benliang .
MITOCHONDRIAL DNA PART A, 2016, 27 (03) :1892-1894
[7]   The complete mitochondrial genome of the giant African snail Achatina fulica (Mollusca: Achatinidae) [J].
Yang, Huirong ;
Zhang, Jia-En ;
Guo, Jing ;
Deng, Zhixin ;
Luo, Hao ;
Luo, Mingzhu ;
Zhao, Benliang .
MITOCHONDRIAL DNA PART A, 2016, 27 (03) :1622-1624
[8]   Complete mitochondrial genome of a freshwater snail, Semisulcospira libertina (Cerithioidea: Semisulcospiridae) [J].
Zeng, Tai ;
Yin, Wei ;
Xia, Rong ;
Fu, Cuizhang ;
Jin, Binsong .
MITOCHONDRIAL DNA, 2015, 26 (06) :897-898
[9]  
Zhou Yong-Can, 1996, Acta Zoologica Sinica, V42, P343