DNA barcoding reveals species composition of sharks and rays in the Indian commercial fishery

被引:50
作者
Bineesh, K. K. [1 ]
Gopalakrishnan, A. [2 ]
Akhilesh, K. V. [2 ]
Sajeela, K. A. [1 ]
Abdussamad, E. M. [2 ]
Pillai, N. G. K. [2 ]
Basheer, V. S. [1 ]
Jena, J. K. [3 ]
Ward, Robert D. [4 ]
机构
[1] Nat Bur Fish Genet Resources, Cent Marine Fisheries Res Inst Campus Ernakulam N, Kochi, Kerala, India
[2] Cent Marine Fisheries Res Inst, Kochi, Kerala, India
[3] Natl Bur Fish Genet Resources, Lucknow, Uttar Pradesh, India
[4] CSIRO Natl Res Collect Australia, Hobart, Tas, Australia
关键词
Barcoding; chondrichthyans; identification; COI; Indian Ocean; taxonomy; SKATES CHONDRICHTHYES; IDENTIFICATION; ATLANTIC; SQUALIFORMES; ELASMOBRANCHS; CENTROPHORUS; DIVERSITY; TAXONOMY; RAJIDAE; RECORD;
D O I
10.3109/19401736.2015.1137900
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
DNA, barcoding was successfully used for the accurate identification of chondrichthyans in the Indian commercial marine fishery. About 528 specimens of 111 chondrichthyan species and 34 families, collected from the Indian EEZ, were barcoded for a 655 bp region of the mitochondria! gene cytochrome c oxidase subunit 1 (COI). Generally, five specimens per species were barcoded, but numbers ranged from 2 to 13. The average Kimura 2 parameter (K2P) distance separating individuals within species was 0.32%, and the average distance separating species within genera was 6.73%. Ten species were suggested as putative new species requiring formal descriptions. Based on the morphology and molecular support, 11 elasmobranch species were confirmed first records for Indian waters. The present study confirms the ability of DNA barcoding for the accurate identification of sharks, rays, and their products from Indian waters.
引用
收藏
页码:458 / 472
页数:15
相关论文
共 50 条
  • [31] DNA barcoding and misidentification of some marine fish species in Nigerian industrial trawl fishery
    Bolaji, Dunsin Abimbola
    Lawal-Are, Aderonke O.
    Kuton, Minasu P.
    [J]. SCIENTIFIC AFRICAN, 2023, 20
  • [32] Comparison of DNA extraction methods on CITES-listed timber species and application in species authentication of commercial products using DNA barcoding
    But, Grace Wing-Chiu
    Wu, Hoi-Yan
    Siu, Tin-Yan
    Chan, Kwun-Tin
    Wong, Kwan-Ho
    Lau, David Tai-Wai
    Shaw, Pang-Chui
    [J]. SCIENTIFIC REPORTS, 2023, 13 (01)
  • [33] Using DNA Barcoding to Investigate Patterns of Species Utilisation in UK Shark Products Reveals Threatened Species on Sale
    Hobbs, Catherine A. D.
    Potts, Robert W. A.
    Walsh, Matthew Bjerregaard
    Usher, Jane
    Griffiths, Andrew M.
    [J]. SCIENTIFIC REPORTS, 2019, 9 (1)
  • [34] DNA Barcoding of Bemisia tabaci Complex (Hemiptera: Aleyrodidae) Reveals Southerly Expansion of the Dominant Whitefly Species on Cotton in Pakistan
    Ashfaq, Muhammad
    Hebert, Paul D. N.
    Mirza, M. Sajjad
    Khan, Arif M.
    Mansoor, Shahid
    Shah, Ghulam S.
    Zafar, Yusuf
    [J]. PLOS ONE, 2014, 9 (08):
  • [35] DNA barcoding of southern African crustaceans reveals a mix of invasive species and potential cryptic diversity
    Bezeng, Bezeng S.
    van der Bank, Herman F.
    [J]. PLOS ONE, 2019, 14 (09):
  • [36] DNA barcoding reveals an unexpected distribution of two Megaleporinus species in the La Plata Basin system
    Coronel, Florencia Paola
    Loretan, Gisela
    Sanchez, Sebastian
    Silva, Natalia
    Pacheco-Sierra, Gualberto
    Brancolini, Florencia
    Aichino, Danilo
    Vargas, Facundo
    Scarabotti, Pablo
    Espinola, Luis
    Pavanelli, Carla Simone
    Rueda, Eva Carolina
    [J]. FRONTIERS IN ECOLOGY AND EVOLUTION, 2025, 12
  • [37] DNA barcoding reveals a likely second species of Asian sea bass (barramundi) (Lates calcarifer)
    Ward, R. D.
    Holmes, B. H.
    Yearsley, G. K.
    [J]. JOURNAL OF FISH BIOLOGY, 2008, 72 (02) : 458 - 463
  • [38] DNA barcoding reveals a high incidence of fish species misrepresentation and substitution on the South African market
    Cawthorn, Donna-Maree
    Steinman, Harris Andrew
    Witthuhn, R. Corli
    [J]. FOOD RESEARCH INTERNATIONAL, 2012, 46 (01) : 30 - 40
  • [39] DNA barcoding reveals twelve lineages with properties of phylogenetic and biological species within Melitaea didyma sensu lato (Lepidoptera, Nymphalidae)
    Pazhenkova, Elena A.
    Zakharov, Evgeny V.
    Lukhtanov, Vladimir A.
    [J]. ZOOKEYS, 2015, (538) : 35 - 46
  • [40] DNA barcoding reveals the temporal community composition of drifting fish eggs in the lower Hongshui River, China
    Chen, Weitao
    Zhu, Shuli
    Yang, Jiping
    Li, Xinhui
    Li, Yuefei
    Li, Jie
    [J]. ECOLOGY AND EVOLUTION, 2021, 11 (16): : 11507 - 11514