helminthR: an R interface to the London Natural History Museum's Host-Parasite Database

被引:30
作者
Dallas, Tad [1 ]
机构
[1] Univ Georgia, Odum Sch Ecol, Athens, GA 30602 USA
关键词
INFECTIONS;
D O I
10.1111/ecog.02131
中图分类号
X176 [生物多样性保护];
学科分类号
090705 ;
摘要
The understanding of the diversity and distribution of helminth parasites is currently constrained by the limited number of host-parasite interaction databases, and the difficulty in accessing existing data. The London Natural History Museum's Host-Parasite Database represents one such underutilized database, containing over a quarter million helminth parasite occurrence records, accessible through a web interface. To enable users to programmatically search and manipulate data from this database, I developed an R package called helminthR. Here, I introduce the core functions of the package, and detail how helminthR can be used to obtain host-parasite interaction records, citations for interactions, and host taxonomic data.
引用
收藏
页码:391 / 393
页数:3
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