Pan-Cancer Biomarkers Changing the Landscape of Molecular Testing

被引:10
作者
Yao, Jinjuan [1 ]
Arcila, Maria E. [1 ]
Ladanyi, Marc [1 ]
Hechtman, Jaclyn F. [1 ]
机构
[1] Mem Sloan Kettering Canc Ctr, Dept Pathol, Diagnost Mol Serv, New York, NY 10065 USA
关键词
MICROSATELLITE INSTABILITY DETECTION; NONPOLYPOSIS COLORECTAL-CANCER; TUMOR MUTATION BURDEN; PD-1; BLOCKADE; LYNCH-SYNDROME; RET; FUSION; RESISTANCE; THERAPY; PERFORMANCE;
D O I
10.5858/arpa.2020-0513-RA
中图分类号
R446 [实验室诊断]; R-33 [实验医学、医学实验];
学科分类号
1001 ;
摘要
Context.-The increasing use of large panel next-generation sequencing technologies in clinical settings has facilitated the identification of pan-cancer biomarkers, which can be diagnostic, prognostic, predictive, or most importantly, actionable. Objective.-To discuss recently approved and emerging pan-cancer and multihistology biomarkers as well as testing methodologies. Data Sources.-The US Food and Drug Administration approval documents, National Comprehensive Cancer Network guidelines, literature, and authors' own publications. Conclusions.-Since 2017, the US Food and Drug Administration has approved genotype-directed therapies for pan-cancer biomarkers, including microsatellite instability, neurotrophic receptor kinases fusions, and hightumor mutation burden. Both the importance and rarity of these biomarkers have increased the prevalence of genomic profiling across solid malignancies. As an integral part of the management team of patients with advanced cancer, pathologists need to be aware of these emerging biomarkers, the therapies for which they determine eligibility, and the strengths and pitfalls of the available clinical assays.
引用
收藏
页码:692 / 698
页数:7
相关论文
共 52 条
[1]   Neoadjuvant Therapy Induces Loss of MSH6 Expression in Colorectal Carcinoma [J].
Bao, Fei ;
Panarelli, Nicole C. ;
Rennert, Hanna ;
Sherr, David L. ;
Yantiss, Rhonda K. .
AMERICAN JOURNAL OF SURGICAL PATHOLOGY, 2010, 34 (12) :1798-1804
[2]   High Yield of RNA Sequencing for Targetable Kinase Fusions in Lung Adenocarcinomas with No Mitogenic Driver Alteration Detected by DNA Sequencing and Low Tumor Mutation Burden [J].
Benayed, Ryma ;
Offin, Michael ;
Mullaney, Kerry ;
Sukhadia, Purvil ;
Rios, Kelly ;
Desmeules, Patrice ;
Ptashkin, Ryan ;
Won, Helen ;
Chang, Jason ;
Halpenny, Darragh ;
Schram, Alison M. ;
Rudin, Charles M. ;
Hyman, David M. ;
Arcila, Maria E. ;
Berger, Michael F. ;
Zehir, Ahmet ;
Kris, Mark G. ;
Drilon, Alexander ;
Ladanyi, Marc .
CLINICAL CANCER RESEARCH, 2019, 25 (15) :4712-4722
[3]   Evolution of the nomenclature for the hereditary colorectal cancer syndromes [J].
Boland, CR .
FAMILIAL CANCER, 2005, 4 (03) :211-218
[4]   Genomic profiling and efficacy of anti-EGFR therapy in appendiceal adenocarcinoma. [J].
Braghiroli, Maria Ignez Freitas Melro ;
Nash, Garrett Michael ;
Morris, Martin ;
Hechtman, Jaclyn Frances ;
Vakiani, Efsevia ;
Berger, Michael F. ;
Solit, David B. ;
Saltz, Leonard ;
Cercek, Andrea .
JOURNAL OF CLINICAL ONCOLOGY, 2016, 34 (04)
[5]   Analytical performance of TruSight® Tumor 170 on small nucleotide variations and gene amplifications using DNA from formalin-fixed, paraffin-embedded (FFPE) solid tumor samples [J].
Chou, Danny ;
Chen, Xiao ;
Purdy, Austin ;
Teng, Li ;
Luo, Byron ;
Zhao, Chen ;
Ball, Laurel ;
Castaneda, Allan ;
Clark, Katie ;
Crain, Brian ;
Daulo, Anthony ;
Do, Manh ;
Du, Tingting ;
Dumm, Sarah ;
Han, Yonmee ;
Havern, Michael ;
Hsieh, Chia-Ling ;
Jiang, Tingting ;
Johansen, Suzanne ;
Lang, Scott ;
Liang, Rachel ;
LoCoco, Jennifer S. ;
McLean, Jaime ;
Nassiri, Yousef ;
Rostron, Jason ;
Silhavy, Jennifer ;
Snedecor, June ;
Talago, Natasha ;
Wu, Kevin ;
Zlatkov, Clare ;
Kuraishy, Ali ;
Gutekunst, Karen ;
De Rozieres, Sohela ;
Friedenberg, Matthew ;
Chuang, Han-Yu ;
Jager, Anne C. .
CANCER RESEARCH, 2017, 77
[6]   NTRK fusion-positive cancers and TRK inhibitor therapy [J].
Cocco, Emiliano ;
Scaltriti, Maurizio ;
Drilon, Alexander .
NATURE REVIEWS CLINICAL ONCOLOGY, 2018, 15 (12) :731-747
[7]   Genomics of response to immune checkpoint therapies for cancer: implications for precision medicine [J].
Conway, Jake R. ;
Kofman, Eric ;
Mo, Shirley S. ;
Elmarakeby, Haitham ;
Van Allen, Eliezer .
GENOME MEDICINE, 2018, 10
[8]   Efficacy of Larotrectinib in TRK Fusion-Positive Cancers in Adults and Children [J].
Drilon, A. ;
Laetsch, T. W. ;
Kummar, S. ;
DuBois, S. G. ;
Lassen, U. N. ;
Demetri, G. D. ;
Nathenson, M. ;
Doebele, R. C. ;
Farago, A. F. ;
Pappo, A. S. ;
Turpin, B. ;
Dowlati, A. ;
Brose, M. S. ;
Mascarenhas, L. ;
Federman, N. ;
Berlin, J. ;
El-Deiry, W. S. ;
Baik, C. ;
Deeken, J. ;
Boni, V. ;
Nagasubramanian, R. ;
Taylor, M. ;
Rudzinski, E. R. ;
Meric-Bernstam, F. ;
Sohal, D. P. S. ;
Ma, P. C. ;
Raez, L. E. ;
Hechtman, J. F. ;
Benayed, R. ;
Ladanyi, M. ;
Tuch, B. B. ;
Ebata, K. ;
Cruickshank, S. ;
Ku, N. C. ;
Cox, M. C. ;
Hawkins, D. S. ;
Hong, D. S. ;
Hyman, D. M. .
NEW ENGLAND JOURNAL OF MEDICINE, 2018, 378 (08) :731-739
[9]   Response to Cabozantinib in Patients with RET Fusion-Positive Lung Adenocarcinomas [J].
Drilon, Alexander ;
Wang, Lu ;
Hasanovic, Adnan ;
Suehara, Yoshiyuki ;
Lipson, Doron ;
Stephens, Phil ;
Ross, Jeffrey ;
Miller, Vincent ;
Ginsberg, Michelle ;
Zakowski, Maureen F. ;
Kris, Mark G. ;
Ladanyi, Marc ;
Rizvi, Naiyer .
CANCER DISCOVERY, 2013, 3 (06) :630-635
[10]   A phase 1 study of LOXO-292, a potent and highly selective RET inhibitor, in patients with RET-altered cancers. [J].
Drilon, Alexander E. ;
Subbiah, Vivek ;
Oxnard, Geoffrey R. ;
Bauer, Todd Michael ;
Velcheti, Vamsidhar ;
Lakhani, Nehal J. ;
Besse, Benjamin ;
Park, Keunchil ;
Patel, Jyoti D. ;
Cabanillas, Maria E. ;
Johnson, Melissa Lynne ;
Reckamp, Karen L. ;
Boni, Valentina ;
Loong, Herbert H. F. ;
Schlumberger, Martin ;
Solomon, Ben ;
Cruickshank, Scott ;
Rothenberg, Stephen M. ;
Shah, Manisha H. ;
Wirth, Lori J. .
JOURNAL OF CLINICAL ONCOLOGY, 2018, 36 (15)