Personalized sequencing and the future of medicine: discovery, diagnosis and defeat of disease

被引:53
作者
Esplin, Edward D. [1 ]
Oei, Ling [1 ]
Snyder, Michael P. [1 ]
机构
[1] Stanford Univ, Sch Med, Dept Genet, 300 Pasteur Dr, Stanford, CA 94305 USA
关键词
cancer genomics; disease discovery; electronic medical record; genomic medicine; individualized therapy; next-generation sequencing; personalized medicine; pharmacogenetics; pharmacogenomics; precision medicine; prevention; whole-exome sequencing; whole-genome sequencing; REVERSE-TRANSCRIPTASE; ENVIRONMENTAL-FACTORS; CLONAL EVOLUTION; CANCER GENOME; WHOLE-EXOME; MUTATIONS; ASSOCIATION; HYPERSENSITIVITY; HLA-B-ASTERISK-5701; RISK;
D O I
10.2217/pgs.14.117
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
The potential for personalized sequencing to individually optimize medical treatment in diseases such as cancer and for pharmacogenomic application is just beginning to be realized, and the utility of sequencing healthy individuals for managing health is also being explored. The data produced requires additional advancements in interpretation of variants of unknown significance to maximize clinical benefit. Nevertheless, personalized sequencing, only recently applied to clinical medicine, has already been broadly applied to the discovery and study of disease. It is poised to enable the earlier and more accurate diagnosis of disease risk and occurrence, guide prevention and individualized intervention as well as facilitate monitoring of healthy and treated patients, and play a role in the prevention and recurrence of future disease. This article documents the advancing capacity of personalized sequencing, reviews its impact on disease-oriented scientific discovery and anticipates its role in the future of medicine.
引用
收藏
页码:1771 / 1790
页数:20
相关论文
共 89 条
[1]   Wild-type KRAS is required for panitumumab efficacy in patients with metastatic colorectal cancer [J].
Amado, Rafael G. ;
Wolf, Michael ;
Peeters, Marc ;
Van Cutsem, Eric ;
Siena, Salvatore ;
Freeman, Daniel J. ;
Juan, Todd ;
Sikorski, Robert ;
Suggs, Sid ;
Radinsky, Robert ;
Patterson, Scott D. ;
Chang, David D. .
JOURNAL OF CLINICAL ONCOLOGY, 2008, 26 (10) :1626-1634
[2]   Clinical assessment incorporating a personal genome [J].
Ashley, Euan A. ;
Butte, Atul J. ;
Wheeler, Matthew T. ;
Chen, Rong ;
Klein, Teri E. ;
Dewey, Frederick E. ;
Dudley, Joel T. ;
Ormond, Kelly E. ;
Pavlovic, Aleksandra ;
Morgan, Alexander A. ;
Pushkarev, Dmitry ;
Neff, Norma F. ;
Hudgins, Louanne ;
Gong, Li ;
Hodges, Laura M. ;
Berlin, Dorit S. ;
Thorn, Caroline F. ;
Sangkuhl, Katrin ;
Hebert, Joan M. ;
Woon, Mark ;
Sagreiya, Hersh ;
Whaley, Ryan ;
Knowles, Joshua W. ;
Chou, Michael F. ;
Thakuria, Joseph V. ;
Rosenbaum, Abraham M. ;
Zaranek, Alexander Wait ;
Church, George M. ;
Greely, Henry T. ;
Quake, Stephen R. ;
Altman, Russ B. .
LANCET, 2010, 375 (9725) :1525-1535
[3]   Genetic Interactions in Cancer Progression and Treatment [J].
Ashworth, Alan ;
Lord, Christopher J. ;
Reis-Filho, Jorge S. .
CELL, 2011, 145 (01) :30-38
[4]   Clinical whole-exome sequencing: are we there yet? [J].
Atwal, Paldeep Singh ;
Brennan, Marie-Louise ;
Cox, Rachel ;
Niaki, Michael ;
Platt, Julia ;
Homeyer, Margaret ;
Kwan, Andrea ;
Parkin, Sylvie ;
Schelley, Susan ;
Slattery, Leah ;
Wilnai, Yael ;
Bernstein, Jonathan Adam ;
Enns, Gregory M. ;
Hudgins, Louanne .
GENETICS IN MEDICINE, 2014, 16 (09) :717-719
[5]   Whole-Genome Sequencing for Optimized Patient Management [J].
Bainbridge, Matthew N. ;
Wiszniewski, Wojciech ;
Murdock, David R. ;
Friedman, Jennifer ;
Gonzaga-Jauregui, Claudia ;
Newsham, Irene ;
Reid, Jeffrey G. ;
Fink, John K. ;
Morgan, Margaret B. ;
Gingras, Marie-Claude ;
Muzny, Donna M. ;
Hoang, Linh D. ;
Yousaf, Shahed ;
Lupski, James R. ;
Gibbs, Richard A. .
SCIENCE TRANSLATIONAL MEDICINE, 2011, 3 (87)
[6]   Exome sequencing as a tool for Mendelian disease gene discovery [J].
Bamshad, Michael J. ;
Ng, Sarah B. ;
Bigham, Abigail W. ;
Tabor, Holly K. ;
Emond, Mary J. ;
Nickerson, Deborah A. ;
Shendure, Jay .
NATURE REVIEWS GENETICS, 2011, 12 (11) :745-755
[7]   Mutation-based detection and monitoring of cell-free tumor DNA in peripheral blood of cancer patients [J].
Benesova, L. ;
Belsanova, B. ;
Suchanek, S. ;
Kopeckova, M. ;
Minarikova, P. ;
Lipska, L. ;
Levy, M. ;
Visokai, V. ;
Zavoral, M. ;
Minarik, M. .
ANALYTICAL BIOCHEMISTRY, 2013, 433 (02) :227-234
[8]   Deploying whole genome sequencing in clinical practice and public health: Meeting the challenge one bin at a time [J].
Berg, Jonathan S. ;
Khoury, Muin J. ;
Evans, James P. .
GENETICS IN MEDICINE, 2011, 13 (06) :499-504
[9]   Individualization of Tamoxifen Treatment for Breast Carcinoma [J].
Binkhorst, L. ;
van Gelder, T. ;
Mathijssen, R. H. J. .
CLINICAL PHARMACOLOGY & THERAPEUTICS, 2012, 92 (04) :431-433
[10]   Accumulation of driver and passenger mutations during tumor progression [J].
Bozic, Ivana ;
Antal, Tibor ;
Ohtsuki, Hisashi ;
Carter, Hannah ;
Kim, Dewey ;
Chen, Sining ;
Karchin, Rachel ;
Kinzler, Kenneth W. ;
Bogelstein, Bert ;
Nowak, Martin A. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (43) :18545-18550