Membrane remodeling and mechanics: Experiments and simulations of α-Synuclein

被引:38
|
作者
West, Ana [1 ]
Brummel, Benjamin E. [1 ]
Braun, Anthony R. [2 ]
Rhoades, Elizabeth [3 ]
Sachs, Jonathan N. [1 ]
机构
[1] Univ Minnesota, Dept Biomed Engn, Nils Hasselmo Hall,312 Church St SE, Minneapolis, MN 55455 USA
[2] Univ Minnesota, Dept Neurosci, 321 Church St SE, Minneapolis, MN 55455 USA
[3] Univ Penn, Dept Chem, 231 S 34th St, Philadelphia, PA 19104 USA
来源
基金
美国国家卫生研究院;
关键词
alpha-Synuclein; Parkinson's disease; Synaptic vesicles; Membrane curvature; Tubulation; Bilayer rigidity; Coarse-grained molecular dynamics (CGMD); X-RAY-SCATTERING; N-BAR DOMAIN; CURVATURE ELASTIC-MODULUS; LIPID-BILAYERS; THERMAL FLUCTUATIONS; STRUCTURAL BASIS; BENDING RIGIDITY; AMPHIPATHIC HELICES; GAUSSIAN CURVATURE; FORCE-FIELD;
D O I
10.1016/j.bbamem.2016.03.012
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We review experimental and simulation approaches that have been used to determine curvature generation and remodeling of lipid bilayers by membrane-bending proteins. Particular emphasis is placed on the complementary approaches used to study alpha-Synuclein (alpha Syn), a major protein involved in Parkinson's disease (PD). Recent cellular and biophysical experiments have shown that the protein 1) deforms the native structure of mitochondrial and model membranes; and 2) inhibits vesicular fusion. Today's advanced experimental and computational technology has made it possible to quantify these protein-induced changes in membrane shape and material properties. Collectively, experiments, theory and multi-scale simulation techniques have established the key physical determinants of membrane remodeling and rigidity: protein binding energy, protein partition depth, protein density, and membrane tension. Despite the exciting and significant progress made in recent years in these areas, challenges remain in connecting biophysical insights to the cellular processes that lead to disease. This article is part of a Special Issue entitled: Membrane Proteins edited by J.C. Gumbart and Sergei Noskov. (C) 2016 Published by Elsevier B.V.
引用
收藏
页码:1594 / 1609
页数:16
相关论文
共 50 条
  • [1] Membrane Remodeling by α-Synuclein and Effects on Amyloid Formation
    Jiang, Zhiping
    de Messieres, Michel
    Lee, Jennifer C.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2013, 135 (43) : 15970 - 15973
  • [2] Using Molecular Dynamics Simulations and Atomic Force Microscopy to Determine How α-Synuclein Affects Membrane Mechanics
    Brummel, Benjamin E.
    Sachs, Jonathan
    BIOPHYSICAL JOURNAL, 2016, 110 (03) : 243A - 243A
  • [3] Direct Visualization of Model Membrane Remodeling by α-Synuclein Fibrillization
    Chaudhary, Himanshu
    Subramaniam, Vinod
    Claessens, Mireille M. A. E.
    CHEMPHYSCHEM, 2017, 18 (12) : 1620 - 1626
  • [4] Membrane remodeling by α-synuclein: Tubules, ribbons, discs, and more
    Jiang, Zhiping
    Lee, Jennifer
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2017, 254
  • [5] Molecular simulations of membrane sensing and remodeling dynamics
    Hummer, Gerhard
    Covino, Roberto
    Bahrami, Amir
    Bhaskara, Ramachandra
    Koefinger, Juergen
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2017, 253
  • [6] Knee ligaments mechanics From experiments to FE simulations
    Arnoux, Pierre-Jean
    Subit, Damien
    Masson, Catherine
    Chabrand, Patrick
    Brunet, Christian
    EUROPEAN JOURNAL OF COMPUTATIONAL MECHANICS, 2005, 14 (4-5): : 577 - 600
  • [7] Interplay of α-synuclein with Lipid Membranes: Cooperative Adsorption, Membrane Remodeling and Coaggregation
    Makasewicz, Katarzyna
    Linse, Sara
    Sparr, Emma
    JACS AU, 2024, 4 (04): : 1250 - 1262
  • [8] Membrane Remodeling and Stimulation of Aggregation Following α-Synuclein Adsorption to Phosphotidylserine Vesicles
    Hoover, Brandon M.
    Shen, Zhizhang
    Gahan, Curran G.
    Lynn, David M.
    Van Lehn, Reid C.
    Murphy, Regina M.
    JOURNAL OF PHYSICAL CHEMISTRY B, 2021, 125 (06): : 1582 - 1594
  • [9] Multiscale simulations of protein-facilitated membrane remodeling
    Davtyan, Aram
    Simunovic, Mijo
    Voth, Gregory A.
    JOURNAL OF STRUCTURAL BIOLOGY, 2016, 196 (01) : 57 - 63
  • [10] Coupling systems biology with multiscale mechanics, for computer simulations of bone remodeling
    Scheiner, Stefan
    Pivonka, Peter
    Hellmich, Christian
    COMPUTER METHODS IN APPLIED MECHANICS AND ENGINEERING, 2013, 254 : 181 - 196