Succinimide and isoaspartate residues in the crystal structures of hen egg-white lysozyme complexed with tri-N-acetylchitotriose

被引:45
|
作者
Noguchi, S [1 ]
Miyawaki, K [1 ]
Satow, Y [1 ]
机构
[1] Univ Tokyo, Grad Sch Pharmaceut Sci, Bunkyo Ku, Tokyo 1130033, Japan
关键词
succinimide; isoaspartate; crystal structure; hen egg-white lysozyme; post-translational modification;
D O I
10.1006/jmbi.1998.1674
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The isomerization of Asp101 to isoaspartate autocatalytically proceeds via a succinimide intermediate in hen egg-white lysozyme at a mildly acidic condition. The crystal structures of succinimide and isoaspartate forms of the lysozyme proteins, each complexed with a tri-N-acetylchito triose ligand, have been determined at 1.8 Angstrom resolution, and distinctively elucidate coplanar cyclic aminosuccinyl and beta-linked isoaspartyl residues. Compared with the liganded native protein with normal Asp101, succinimide 101 protrudes toward the ligand, and isoaspartate 101 extends away from the ligand. The formations of these residues caused the loss of three hydrogen-bonds between the ligand and the side-chains of Asp101 and Asn103 along with 0.5 Angstrom displacement of the ligand location. (C) 1998 Academic Press Limited.
引用
收藏
页码:231 / 238
页数:8
相关论文
共 50 条
  • [41] HEN EGG-WHITE LYSOZYME .3. SYNTHESIS OF 2-15 N-TERMINAL TETRADECAPEPTIDE
    GUARNERI, M
    BENASSI, CA
    FERRONI, R
    GUGGI, A
    TOMATIS, R
    ROCCHI, R
    GAZZETTA CHIMICA ITALIANA, 1971, 101 (05): : 375 - &
  • [42] CONFORMATIONAL TRANSITION OF SYNTHETIC 2-15 N-TERMINAL FRAGMENT OF HEN EGG-WHITE LYSOZYME
    BENASSI, CA
    FERRONI, R
    GUARNERI, M
    GUGGI, A
    TAMBURRO, AM
    TOMATIS, R
    ROCCHI, R
    FEBS LETTERS, 1971, 14 (05) : 346 - &
  • [43] Binding Structures of Tri-N-acetyl-β-glucosamine in Hen Egg White Lysozyme using Molecular Dynamics with a Polarizable Force Field
    Zhong, Yang
    Patel, Sandeep
    JOURNAL OF COMPUTATIONAL CHEMISTRY, 2013, 34 (03) : 163 - 174
  • [44] Effects of organic solvents on protein structures: Observation of a structured helical core in hen egg-white lysozyme in aqueous dimethylsulfoxide
    Bhattacharjya, S
    Balaram, P
    PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1997, 29 (04): : 492 - 507
  • [45] High-resolution crystal structures of a "half sandwich"-type Ru(II) coordination compound bound to hen egg-white lysozyme and proteinase K
    Chiniadis, Lykourgos
    Bratsos, Ioannis
    Bethanis, Kostas
    Karpusas, Michael
    Giastas, Petros
    Papakyriakou, Athanasios
    JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY, 2020, 25 (04): : 635 - 645
  • [46] High-resolution crystal structures of a “half sandwich”-type Ru(II) coordination compound bound to hen egg-white lysozyme and proteinase K
    Lykourgos Chiniadis
    Ioannis Bratsos
    Kostas Bethanis
    Michael Karpusas
    Petros Giastas
    Athanasios Papakyriakou
    JBIC Journal of Biological Inorganic Chemistry, 2020, 25 : 635 - 645
  • [47] SELECTIVE CHEMICAL CLEAVAGE OF PEPTIDE-BOND AT N'-FORMYLKYNURENINE IN OZONE-OXIDIZED HEN EGG-WHITE LYSOZYME
    SAKIYAMA, F
    JOURNAL OF BIOCHEMISTRY, 1977, 82 (02): : 365 - 375
  • [48] FURTHER STUDIES ON SPECIFICITY OF N-TERMINAL AND C-TERMINAL ANTIGENIC DETERMINANT OF HEN EGG-WHITE LYSOZYME
    HA, YM
    FUJIO, H
    SAKATO, N
    AMANO, T
    BIKEN JOURNAL, 1975, 18 (02) : 47 - 60
  • [49] FLUORESCENCE CHARACTERISTICS OF KYNURENINE AND N'-FORMYLKYNURENINE - THEIR USE AS REPORTERS OF THE ENVIRONMENT OF TRYPTOPHAN-62 IN HEN EGG-WHITE LYSOZYME
    FUKUNAGA, Y
    KATSURAGI, Y
    IZUMI, T
    SAKIYAMA, F
    JOURNAL OF BIOCHEMISTRY, 1982, 92 (01): : 129 - 141
  • [50] HIGH RESOLUTION CRYSTAL STRUCTURE OF FREE ANTIBODY HYHEL-63 AND COMPLEX WITH ITS ANTIGEN HEN EGG-WHITE LYSOZYME
    Li, Hongmin
    Li, Yili
    Smith-Gill, Sandra J.
    Mariuzza, Roy A.
    ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 1999, 55 : 353 - 353