Integration of transcriptomic and metabolic data reveals hub transcription factors involved in drought stress response in sunflower (Helianthus annuus L.)

被引:53
作者
Moschen, Sebastian [1 ,2 ]
Di Rienzo, Julio A. [3 ]
Higgins, Janet [4 ]
Tohge, Takayuki [5 ]
Watanabe, Mutsumi [5 ]
Gonzalez, Sergio [1 ,2 ]
Rivarola, Mÿximo [1 ,2 ]
Garcia-Garcia, Francisco [6 ]
Dopazo, Joaquin [6 ]
Esteban Hopp, H. [1 ]
Hoefgen, Rainer [5 ]
Fernie, Alisdair R. [5 ]
Paniego, Norma [1 ,2 ]
Fernandez, Paula [1 ,2 ,8 ]
Heinz, Ruth A. [1 ,2 ,7 ]
机构
[1] Inst Nacl Tecnol & Agr, Ctr Invest Ciencias Agron & Vet, Inst Biotecnol, Buenos Aires, DF, Argentina
[2] Consejo Nacl Invest Cient & Tecn, Buenos Aires, DF, Argentina
[3] Univ Nacl Cordoba, Fac Ciencias Agr, Cordoba, Argentina
[4] Earlham Inst, Norwich Res Pk, Norwich NR4 7UZ, Norfolk, England
[5] Max Planck Inst Mol Pflanzenphysiol, Potsdam, Germany
[6] Ctr Invest Biomed Red Enfermedades Raras CIBERER, Bioinformat Rare Dis BiER, Funct Genom Node INB ELIXIR Es, Computat Genom Dept,Ctr Invest Principe Felipe, Valencia 46012, Spain
[7] Univ Buenos Aires, Fac Ciencias Exactas & Nat, Buenos Aires, DF, Argentina
[8] Univ Nacl San Martin, Escuela Ciencia & Tecnol, Buenos Aires, DF, Argentina
关键词
Sunflower; Helianthus annuus L; Drought; Transcriptomics; Metabolomics; Data integration; LEUCINE ZIPPER GENE; WATER-STRESS; PROLINE ACCUMULATION; ABIOTIC STRESS; ARABIDOPSIS-THALIANA; PHYSIOLOGICAL-RESPONSES; PHENOTYPIC PLASTICITY; OSMOTIC ADJUSTMENT; NITRATE REDUCTASE; LEAF SENESCENCE;
D O I
10.1007/s11103-017-0625-5
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Drought is one of the most important environmental stresses that effects crop productivity in many agricultural regions. Sunflower is tolerant to drought conditions but the mechanisms involved in this tolerance remain unclear at the molecular level. The aim of this study was to characterize and integrate transcriptional and metabolic pathways related to drought stress in sunflower plants, by using a system biology approach. Our results showed a delay in plant senescence with an increase in the expression level of photosynthesis related genes as well as higher levels of sugars, osmoprotectant amino acids and ionic nutrients under drought conditions. In addition, we identified transcription factors that were upregulated during drought conditions and that may act as hubs in the transcriptional network. Many of these transcription factors belong to families implicated in the drought response in model species. The integration of transcriptomic and metabolomic data in this study, together with physiological measurements, has improved our understanding of the biological responses during droughts and contributes to elucidate the molecular mechanisms involved under this environmental condition. These findings will provide useful biotechnological tools to improve stress tolerance while maintaining crop yield under restricted water availability.
引用
收藏
页码:549 / 564
页数:16
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