Complete mitochondrial genome of the Antarctic crocodile icefish, Chionodraco hamatus (Perciformes: Channichthyidae)

被引:0
|
作者
Liu, Yimeng [1 ]
Chen, Liangbiao [1 ]
Zhang, Dongsheng [1 ]
机构
[1] Shanghai Ocean Univ, Coll Fisheries & Life Sci, Minist Educ, Key Lab Aquacultural Resources & Utilizat, Shanghai, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2016年 / 1卷 / 01期
关键词
Chionodraco hamatus; icefish; mitogenome;
D O I
10.1080/23802359.2016.1144098
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Antarctic icefish Chionodraco hamatus is an ideal model for studying cold adaptation mechanisms. The complete mitochondrial genome of C. hamatus was sequenced in this study. The genome sequence is 17 373 bp in length, which comprises 13 protein-coding genes, 22 tRNAs, two rRNAs and a control region. The overall base composition is A: 26.25%, T: 26.05%, G: 17.49% and C: 30.21%, with an A: T content of 52.3%. The phylogenetic analyses based on the concatenated nucleotide sequences of all the genes and control region supported a relatively close relationship with Parachaenichthys. charcoti. The complete mitochondrial genome sequence will be useful for evolutionary and functional studies of Antarctic Notothenioids.
引用
收藏
页码:138 / 139
页数:2
相关论文
共 50 条
  • [31] The complete mitochondrial genome of the Antarctic marbled rockcod,Notothenia rossii(Perciformes, Nototheniidae)
    Jo, Euna
    Cho, Yll Hwan
    Lee, Seung Jae
    Choi, Eunkyung
    Kim, Jeong-Hoon
    Chi, Young Min
    Kim, Jin-Hyoung
    Park, Hyun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2421 - 2422
  • [32] Complete mitochondrial genome of the Antarctic bullhead notothen, Notothenia coriiceps (Perciformes, Nototheniidae)
    Oh, Jae Soon
    Ahn, Do Hwan
    Lee, Jongkyu
    Choi, Jungeun
    Chi, Young Min
    Park, Hyun
    MITOCHONDRIAL DNA PART A, 2016, 27 (02) : 1407 - 1408
  • [33] APPARENT DEFICIENCY OF METALLOTHIONEIN IN THE LIVER OF THE ANTARCTIC ICEFISH CHIONODRACO-HAMATUS - IDENTIFICATION AND ISOLATION OF A ZINC-CONTAINING PROTEIN UNLIKE METALLOTHIONEIN
    SCUDIERO, R
    DEPRISCO, PP
    CAMARDELLA, L
    DAVINO, R
    DIPRISCO, G
    PARISI, E
    COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY, 1992, 103 (01): : 201 - 207
  • [34] Structural and functional analysis of metal regulatory elements in the promoter region of genes encoding metallothionein isoforms in the Antarctic fish Chionodraco hamatus (icefish)
    Scudiero, R
    Carginale, V
    Capasso, C
    Riggio, M
    Filosa, S
    Parisi, E
    GENE, 2001, 274 (1-2) : 199 - 208
  • [35] Nitrite modulates contractility of teleost (Anguilla anguilla and Chionodraco hamatus, i.e. the Antarctic hemoglobinless icefish) and frog (Rana esculenta) hearts
    Cerra, M. C.
    Angelone, T.
    Parisella, M. L.
    Pellegrino, D.
    Tota, B.
    BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, 2009, 1787 (07): : 849 - 855
  • [36] Whole-Genome Survey and Microsatellite Marker Detection of Antarctic Crocodile Icefish, Chionobathyscus dewitti
    Kim, Jinmu
    Lee, Seung-Jae
    Jo, Euna
    Choi, Eunkyung
    Cho, Minjoo
    Choi, Soyun
    Kim, Jeong-Hoon
    Park, Hyun
    ANIMALS, 2022, 12 (19):
  • [37] The complete mitochondrial genome of Pagetopsis macropterus (Notothenioidei: Channichthyidae) with phylogenetic consideration
    Cao, Ping
    Song, Wei
    Huang, Hongliang
    Li, Lingzhi
    Zhang, Fengying
    Jiang, Keji
    Chen, Xuezhong
    Ma, Lingbo
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1709 - 1710
  • [38] The complete mitochondrial genome of Neopagetopsis ionah (Channichthyidae, neopagetopsis) with phylogenetic consideration
    Sang, Chengde
    Liang, Shuzhang
    Song, Wei
    Huang, Hongliang
    Jiang, Keji
    Chen, Xuezhong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (02): : 1252 - 1253
  • [39] The complete mitochondrial genome of the Ephippus orbis (Perciformes: Ephippidae)
    Wang, Qian
    Wu, Zhongjie
    Sun, Dongyan
    Luo, Jian
    MITOCHONDRIAL DNA PART A, 2016, 27 (05) : 3444 - 3445
  • [40] The complete mitochondrial genome of Diploprion bifasciatum (Perciformes, Serranidae)
    Wang, Huan
    Guo, Limei
    Ding, Shao-Xiong
    MITOCHONDRIAL DNA PART A, 2016, 27 (05) : 3137 - 3138