ForCenS, a curated database of planktonic foraminifera census counts in marine surface sediment samples

被引:90
作者
Siccha, Michael [1 ]
Kucera, Michal [1 ]
机构
[1] Univ Bremen, MARUM Ctr Marine Environm Sci, Leobener Str 8, D-28359 Bremen, Germany
关键词
OCEAN; PACIFIC; RECONSTRUCTION; TEMPERATURES; ASSEMBLAGES; ATLANTIC; PATTERNS;
D O I
10.1038/sdata.2017.109
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Census counts of marine microfossils in surface sediments represent an invaluable resource for paleoceanography and for the investigation of macroecological processes. A prerequisite for such applications is the provision of data syntheses for individual microfossil groups. Specific to such syntheses is the necessity of taxonomical harmonisation across the constituent datasets, coupled with dereplication of previous compilations. Both of these aspects require expert knowledge, but with increasing number of records involved in such syntheses, the application of expert knowledge via manual curation is not feasible. Here we present a synthesis of planktonic foraminifera census counts in surface sediment samples, which is taxonomically harmonised, dereplicated and treated for numerical and other inconsistencies. The data treatment is implemented as an objective and largely automated pipeline, allowing us to reduce the initial 6,984 records to 4,205 counts from unique sites and informative technical or true replicates. We provide the final product and document the procedure, which can be easily adopted for other microfossil data syntheses.
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页数:12
相关论文
共 41 条
[1]   Setting the absolute tempo of biodiversity dynamics [J].
Allen, Andrew P. ;
Savage, Van M. .
ECOLOGY LETTERS, 2007, 10 (07) :637-646
[2]  
Amante C., 2009, NAT GEOPHYS DATA CTR
[3]   Glacial-interglacial stability of ocean pH inferred from foraminifer dissolution rates [J].
Anderson, DM ;
Archer, D .
NATURE, 2002, 416 (6876) :70-73
[4]   A revised taxonomic and phylogenetic concept for the planktonic foraminifer species Globigerinoides ruber based on molecular and morphometric evidence [J].
Aurahs, Ralf ;
Treis, Yvonne ;
Darling, Kate ;
Kucera, Michal .
MARINE MICROPALEONTOLOGY, 2011, 79 (1-2) :1-14
[5]  
Barrows T. T., 2005, PANGAEA
[6]  
CLIMAP Project Members, 1976, Science, V191, P1131
[7]   Southwest Pacific Ocean response to a warmer world: Insights from Marine Isotope Stage 5e [J].
Cortese, G. ;
Dunbar, G. B. ;
Carter, L. ;
Scott, G. ;
Bostock, H. ;
Bowen, M. ;
Crundwell, M. ;
Hayward, B. W. ;
Howard, W. ;
Martinez, J. I. ;
Moy, A. ;
Neil, H. ;
Sabaa, A. ;
Sturm, A. .
PALEOCEANOGRAPHY, 2013, 28 (03) :585-598
[8]  
Cortese G., 2013, PANGAEA
[9]   Glacial-interglacial ocean climate variability from planktonic foraminifera during the Mid-Pleistocene transition in the temperate Southwest Pacific, ODP Site 1123 [J].
Crundwell, Martin ;
Scott, George ;
Naish, Tim ;
Carter, Lionel .
PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY, 2008, 260 (1-2) :202-229
[10]   Predicting the global distribution of planktonic foraminifera using a dynamic ecosystem model [J].
Fraile, I. ;
Schulz, M. ;
Mulitza, S. ;
Kucera, M. .
BIOGEOSCIENCES, 2008, 5 (03) :891-911