Validation of endogenous reference genes for insecticide-induced and developmental expression profiling of Liposcelis bostsrychophila (Psocoptera: Liposcelididae)

被引:52
作者
Jiang, Hong-Bo [1 ]
Liu, Yong-Hua [1 ]
Tang, Pei-An [1 ]
Zhou, An-Wei [1 ]
Wang, Jin-Jun [1 ]
机构
[1] Southwest Univ, Coll Plant Protect, Key Lab Entomol & Pest Control Engn, Chongqing 400716, Peoples R China
基金
高等学校博士学科点专项科研基金;
关键词
Psocoptera; Insecticide induction; Developmental expression; Reference gene selection; REAL-TIME PCR; BOSTRYCHOPHILA BADONNEL PSOCOPTERA; ENTOMOPHILA ENDERLEIN PSOCOPTERA; PAETA PEARMAN PSOCOPTERA; BIOCHEMICAL CHARACTERIZATIONS; HOUSEKEEPING GENES; FIELD POPULATIONS; QUANTITATIVE PCR; SELECTION; QUANTIFICATION;
D O I
10.1007/s11033-009-9803-0
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Four housekeeping genes named Lb beta-Actin1, Lb beta-Actin2, Lb alpha-Tubulin, and LbGapdh were cloned from Liposcelis bostrychophila using the combined techniques of reverse transcriptase-PCR (RT-PCR) with rapid amplification of cDNA ends (RACE). The GenBank accession numbers were FJ196622, FJ447483, FJ595242, and FJ595241, respectively. The full-length cDNA of Lb beta-Actin1 was a 1,772 bp sequence with an open reading frame (ORF) encoded 376 amino acids, while Lb beta-Actin2 was 1,350 bp in length containing an ORF encoded 376 amino acids. Furthermore, the 1,565 bp cDNA of Lb alpha-Tubulin had an ORF of 1,350 bp encoding 450 amino acids. And LbGapdh possessed an ORF of 333 amino acids. Sequences analysis and phylogenetic trees generated from the nucleotide sequences of their coding regions revealed a relationship that was closer to other insects than to mammals. The four genes together with 18S rRNA were quantified for transcription stability in L. bostrychophila, and the geNorm software ranked from the most to least were Lb beta-Actin1 > LbGapdh > Lb alpha-Tubulin > Lb beta-Actin2 > Lb18S rRNA for deltamethrin induction, while ranked Lb beta-Actin1 > Lb alpha-Tubulin > Lb beta-Actin2 > LbGapdh > Lb18S rRNA for the different developmental stages.
引用
收藏
页码:1019 / 1029
页数:11
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