Introduction of ORF3a-Q57H SARS-CoV-2 Variant Causing Fourth Epidemic Wave of COVID-19, Hong Kong, China

被引:26
作者
Chu, Daniel K. W. [1 ]
Hui, Kenrie P. Y. [1 ]
Gu, Haogao [1 ]
Ko, Ronald L. W. [1 ]
Krishnan, Pavithra [1 ]
Ng, Daisy Y. M. [1 ]
Liu, Gigi Y. Z. [1 ]
Wan, Carrie K. C. [1 ]
Cheung, Man-Chun [1 ]
Ng, Ka-Chun [1 ]
Nicholls, John M. [1 ]
Tsang, Dominic N. C. [2 ]
Peiris, Malik [1 ]
Chan, Michael C. W. [1 ]
Poon, Leo L. M. [1 ]
机构
[1] Univ Hong Kong, Hong Kong, Peoples R China
[2] Dept Hlth, Hong Kong, Peoples R China
关键词
D O I
10.3201/eid2705.210015
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
We describe an introduction of clade GH severe acute respiratory syndrome coronavirus 2 causing a fourth wave of coronavirus disease in Hong Kong. The virus has an ORF3a-Q57H mutation, causing truncation of ORF3b. This virus evades induction of cytokine, chemokine, and interferon-stimulated gene expression in primary human respiratory cells.
引用
收藏
页码:1492 / 1495
页数:4
相关论文
共 9 条
[1]   In Flight Transmission of Severe Acute Respiratory SARS-CoV-2 [J].
Choi, Edward M. ;
Chu, Daniel K. W. ;
Cheng, Peter K. C. ;
Tsang, Dominic N. C. ;
Peiris, Malik ;
Bausch, Daniel G. ;
Poon, Leo L. M. ;
Watson-Jones, Deborah .
EMERGING INFECTIOUS DISEASES, 2020, 26 (11) :2713-2716
[2]   Potentially adaptive SARS-CoV-2 mutations discovered with novel spatiotemporal and explainable AI models [J].
Garvin, Michael R. ;
Prates, Erica T. ;
Pavicic, Mirko ;
Jones, Piet ;
Amos, B. Kirtley ;
Geiger, Armin ;
Shah, Manesh B. ;
Streich, Jared ;
Gazolla, Joao Gabriel Felipe Machado ;
Kainer, David ;
Cliff, Ashley ;
Romero, Jonathon ;
Keith, Nathan ;
Brown, James B. ;
Jacobson, Daniel .
GENOME BIOLOGY, 2020, 21 (01)
[3]   Tropism, replication competence, and innate immune responses of the coronavirus SARS-CoV-2 in human respiratory tract and conjunctiva: an analysis in ex-vivo and in-vitro cultures [J].
Hui, Kenrie P. Y. ;
Cheung, Man-Chun ;
Perera, Ranawaka A. P. M. ;
Ng, Ka-Chun ;
Bui, Christine H. T. ;
Ho, John C. W. ;
Ng, Mandy M. T. ;
Kuok, Denise I. T. ;
Shih, Kendrick C. ;
Tsao, Sai-Wah ;
Poon, Leo L. M. ;
Peiris, Malik ;
Nicholls, John M. ;
Chan, Michael C. W. .
LANCET RESPIRATORY MEDICINE, 2020, 8 (07) :687-695
[4]   Tropism, replication competence, and innate immune responses of influenza virus: an analysis of human airway organoids and ex-vivo bronchus cultures [J].
Hui, Kenrie P. Y. ;
Ching, Rachel H. H. ;
Chan, Stan K. H. ;
Nicholls, John M. ;
Sachs, Norman ;
Clevers, Hans ;
Peiris, J. S. Malik ;
Chan, Michael C. W. .
LANCET RESPIRATORY MEDICINE, 2018, 6 (11) :846-854
[5]   Loss of orf3b in the circulating SARS-CoV-2 strains [J].
Lam, Joy-Yan ;
Yuen, Chun-Kit ;
Ip, Jonathan Daniel ;
Wong, Wan-Man ;
To, Kelvin Kai-Wang ;
Yuen, Kwok-Yung ;
Kok, Kin-Hang .
EMERGING MICROBES & INFECTIONS, 2020, 9 (01) :2685-2696
[6]   Infection of dogs with SARS-CoV-2 [J].
Sit, Thomas H. C. ;
Brackman, Christopher J. ;
Ip, Sin Ming ;
Tam, Karina W. S. ;
Law, Pierra Y. T. ;
To, Esther M. W. ;
Yu, Veronica Y. T. ;
Sims, Leslie D. ;
Tsang, Dominic N. C. ;
Chu, Daniel K. W. ;
Perera, Ranawaka A. P. M. ;
Poon, Leo L. M. ;
Peiris, Malik .
NATURE, 2020, 586 (7831) :776-+
[7]   Will a new clade of SARS-CoV-2 imported into the community spark a fourth wave of the COVID-19 outbreak in Hong Kong? [J].
Siu, Gilman Kit-Hang ;
Lee, Lam-Kwong ;
Leung, Kenneth Siu-Sing ;
Leung, Jake Siu-Lun ;
Ng, Timothy Ting-Leung ;
Chan, Chloe Toi-Mei ;
Tam, Kingsley King-Gee ;
Lao, Hiu-Yin ;
Wu, Alan Ka-Lun ;
Yau, Miranda Chong-Yee ;
Lai, Yvette Wai-Man ;
Fung, Kitty Sau-Chun ;
Chau, Sandy Ka-Yee ;
Wong, Barry Kin-Chung ;
To, Wing-Kin ;
Luk, Kristine ;
Ho, Alex Yat-Man ;
Que, Tak-Lun ;
Yip, Kam-Tong ;
Yam, Wing Cheong ;
Shum, David Ho-Keung ;
Yip, Shea Ping .
EMERGING MICROBES & INFECTIONS, 2020, 9 (01) :2497-2500
[8]   Rapid reconstruction of SARS-CoV-2 using a synthetic genomics platform [J].
Tran Thi Nhu Thao ;
Labroussaa, Fabien ;
Ebert, Nadine ;
V'kovski, Philip ;
Stalder, Hanspeter ;
Portmann, Jasmine ;
Kelly, Jenna ;
Steiner, Silvio ;
Holwerda, Melle ;
Kratzel, Annika ;
Gultom, Mitra ;
Schmied, Kimberly ;
Laloli, Laura ;
Huesser, Linda ;
Wider, Manon ;
Pfaender, Stephanie ;
Hirt, Dagny ;
Cippa, Valentina ;
Crespo-Pomar, Silvia ;
Schroeder, Simon ;
Muth, Doreen ;
Niemeyer, Daniela ;
Corman, Victor M. ;
Mueller, Marcel A. ;
Drosten, Christian ;
Dijkman, Ronald ;
Jores, Joerg ;
Thiel, Volker .
NATURE, 2020, 582 (7813) :561-+
[9]   Evasion of Type I Interferon by SARS-CoV-2 [J].
Xia, Hongjie ;
Cao, Zengguo ;
Xie, Xuping ;
Zhang, Xianwen ;
Chen, John Yun-Chung ;
Wang, Hualei ;
Menachery, Vineet D. ;
Rajsbaum, Ricardo ;
Shi, Pei-Yong .
CELL REPORTS, 2020, 33 (01)