Complete mitochondrial genome of Francolinus pintadeanus (Galliformes: Phasianidae)

被引：1

作者：

Li, Xue-Juan ^{[1
]}

Lin, Li-Liang ^{[1
]}

机构：

[1] Shaanxi Normal Univ, Coll Life Sci, Xian 710062, Shaanxi Provinc, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2016年 / 1卷 / 01期

关键词：

Francolinus pintadeanus; mitochondrial genome; phylogenetic analysis; MIXED MODELS;

D O I：

10.1080/23802359.2016.1197059

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

The complete mitochondrial genome (mitogenome) of Francolinus pintadeanus, consisting of 16,693 bp, was determined and analyzed. It displayed as typical genome organization as other Galliformes mitogenomes: 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes and one control region. The phylogenetic relationships of 25 Phasianidae species and three Odontophoridae species as outgroup using maximum likelihood and Bayesian inference methods based on a concatenated dataset from mitogenomes were analyzed. The results reveal that F. pintadeanus had a close relationship with Gallus gallus gallus/Bambusicola thoracica, then this clade formed a sister group with Pavo muticus/Argusianus argus.

引用

页码：579 / 580

页数：2

共 8 条

[1] Hall BP, 1963, B BR MUS NAT HIST, V10, P8
[2] Phylogenetic and molecular dating analysis of Taiwan Blue Pheasant (Lophura swinhoii)
Jiang, Lichun
Wang, Gaochao
Peng, Rui
Peng, Quekun
Zou, Fangdong
[J]. GENE, 2014, 539 (01) : 21 - 29
[3] Incongruence among different mitochondrial regions: A case study using complete mitogenomes
Meikejohn, Kelly A.
Danielson, Melany J.
Faircloth, Brant C.
Glenn, Travis C.
Braun, Edward L.
Kimball, Rebecca T.
[J]. MOLECULAR PHYLOGENETICS AND EVOLUTION, 2014, 78 : 314 - 323
[4] MrBayes 3: Bayesian phylogenetic inference under mixed models
Ronquist, F
Huelsenbeck, JP
[J]. BIOINFORMATICS, 2003, 19 (12) : 1572 - 1574
[5] Shen Y, 2014, PLOS ONE, V9, DOI [10.1371/journal.pone.0087894, 10.1371/journal.pone.0095786]
[6] A mitogenomic perspective on the ancient, rapid radiation in the Galliformes with an emphasis on the Phasianidae
Shen, Yong-Yi
Liang, Lu
Sun, Yan-Bo
Yue, Bi-Song
Yang, Xiao-Jun
Murphy, Robert W.
Zhang, Ya-Ping
[J]. BMC EVOLUTIONARY BIOLOGY, 2010, 10
[7] RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
Stamatakis, Alexandros
[J]. BIOINFORMATICS, 2006, 22 (21) : 2688 - 2690
[8] Yang Chao, 2010, Zoological Research, V31, P333, DOI 10.3724/SP.J.1141.2010.04333

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